mCP1-MI-P-CP1-nzd-g-04-0-UI.s1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTATTGCCATCTCGGAGCCCCCAGTGCCCGCTGCCAGAGAAAAAGGCAAAGAGATCTCGG GTTCTCGAAGACGTGGGTTTACTTCACNCAAGGTCATCATGAAGAAGCTGTCTGCTTTTA ACNAGCGGTGAACTCAGCTTAAGGGAATCTCGGCTCACAGCTTCTAGAGGTCTGCGCACA GTTGATAGACAGGTAGGCCATAGACGTTTCTCCTTTTGCAAGGGGTCTGGCATCAAATCA TCTCTTTTTCCAAAAGAGCCACTCAACAGGTATCCAGGATTATTCTTCCAAACATGCTGG TGTGCAGCAGAGTTCGGTAAACTGCCTCTCTGTGCTTTAAAGTAACCATAGTACTGGAGG TGATGGTACATAAAATCTTCATAGGGATCAGGAAGAGTCTTCGGCTTTGGCTCTTTTTCC AATGCTGGGAACATGTTACTTNTACATGGTATGCTGAAGACCAGTCAGTGACACGGCGTC CAGCCACACCCTTGCCCAATTTCCAAAAGGCACCTGAGGAGGAAGGGCGGCTTGTCTTCA AGCCTCCTTCTCCCGAAGCCCCAGGACTCCTGCCGGCCCCATTGCTTTCTTCTCCCTAAG AAGGAGCTGCCTACCACCAGGACGCCGCAGGAAAGATTAAGAAAAAGGGATGGAGGGATC CGGCGGAGTCGTCTCTGTGGACATGGAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTATTGCCATCTCGGAGCCCCCAGTGCCCGCTGCCAGAGAAAAAGGCAAAGAGATCTCGG GTTCTCGAAGACGTGGGTTTACTTCACNCAAGGTCATCATGAAGAAGCTGTCTGCTTTTA ACNAGCGGTGAACTCAGCTTAAGGGAATCTCGGCTCACAGCTTCTAGAGGTCTGCGCACA GTTGATAGACAGGTAGGCCATAGACGTTTCTCCTTTTGCAAGGGGTCTGGCATCAAATCA TCTCTTTTTCCAAAAGAGCCACTCAACAGGTATCCAGGATTATTCTTCCAAACATGCTGG TGTGCAGCAGAGTTCGGTAAACTGCCTCTCTGTGCTTTAAAGTAACCATAGTACTGGAGG TGATGGTACATAAAATCTTCATAGGGATCAGGAAGAGTCTTCGGCTTTGGCTCTTTTTCC AATGCTGGGAACATGTTACTTNTACATGGTATGCTGAAGACCAGTCAGTGACACGGCGTC CAGCCACACCCTTGCCCAATTTCCAAAAGGCACCTGAGGAGGAAGGGCGGCTTGTCTTCA AGCCTCCTTCTCCCGAAGCCCCAGGACTCCTGCCGGCCCCATTGCTTTCTTCTCCCTAAG AAGGAGCTGCCTACCACCAGGACGCCGCAGGAAAGATTAAGAAAAAGGGATGGAGGGATC CGGCGGAGTCGTCTCTGTGGACATGGAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 509-610, - strand, RNAz p=0.8628 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 509-610, - strand, RNAz p=0.8628 |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 6-150, gnl|bosTau2|chr15 (49523108-49523253) | |
| 6-150, gnl|Hg17|chr11 (47682713-47682858) | |
| 6-150, gnl|Mm7|chr2 (90642319-90642174) | |
| 199-336, gnl|bosTau2|chr15 (49527843-49527980) | |
| 199-336, gnl|canFam2|chr18 (44997156-44997004) | |
| 199-336, gnl|dasNov1|scaffold_140272 (2312-2440) | |
| 199-336, gnl|hg17|chr11 (47688495-47688647) | |
| 199-336, gnl|Hg17|chr11 (47688504-47688641) | |
| 199-336, gnl|loxAfr1|scaffold_794 (120781-120629) | |
| 199-336, gnl|mm7|chr2 (90639795-90639643) | |
| 199-336, gnl|Mm7|chr2 (90639784-90639647) | |
| 199-336, gnl|monDom2|scaffold_33 (13561821-13561973) | |
| 199-336, gnl|oryCun1|scaffold_208031 (57619-57771) | |
| 199-336, gnl|panTro1|chr9 (48216492-48216644) | |
| 199-336, gnl|rn3|chr3 (75046576-75046424) | |
| 509-695, gnl|bosTau2|chr15 (49529644-49529832) | |
| 509-695, gnl|canFam2|chr18 (44995510-44994979) | |
| 509-695, gnl|dasNov1|scaffold_108544 (1869-2374) | |
| 509-695, gnl|echTel1|scaffold_306659 (10387-10018) | |
| 509-695, gnl|hg17|chr11 (47692885-47693377) | |
| 509-695, gnl|Hg17|chr11 (47693016-47693180) | |
| 509-695, gnl|loxAfr1|scaffold_794 (119266-118734) | |
| 509-695, gnl|mm7|chr2 (90634257-90633723) | |
| 509-695, gnl|Mm7|chr2 (90634110-90633911) | |
| 509-695, gnl|monDom2|scaffold_33 (13572352-13572942) | |
| 509-695, gnl|panTro1|chr9 (48220878-48221371) | |
| 509-695, gnl|rheMac2|chr14 (24392113-24391633) | |
| 509-695, gnl|rn3|chr3 (75040585-75040069) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-150, gnl|bosTau2|chr15 (49523108-49523253) | |
| 6-150, gnl|Hg17|chr11 (47682713-47682858) | |
| 6-150, gnl|Mm7|chr2 (90642319-90642174) | |
| 199-336, gnl|bosTau2|chr15 (49527843-49527980) | |
| 199-336, gnl|canFam2|chr18 (44997156-44997004) | |
| 199-336, gnl|dasNov1|scaffold_140272 (2312-2440) | |
| 199-336, gnl|hg17|chr11 (47688495-47688647) | |
| 199-336, gnl|Hg17|chr11 (47688504-47688641) | |
| 199-336, gnl|loxAfr1|scaffold_794 (120781-120629) | |
| 199-336, gnl|mm7|chr2 (90639795-90639643) | |
| 199-336, gnl|Mm7|chr2 (90639784-90639647) | |
| 199-336, gnl|monDom2|scaffold_33 (13561821-13561973) | |
| 199-336, gnl|oryCun1|scaffold_208031 (57619-57771) | |
| 199-336, gnl|panTro1|chr9 (48216492-48216644) | |
| 199-336, gnl|rn3|chr3 (75046576-75046424) | |
| 509-695, gnl|bosTau2|chr15 (49529644-49529832) | |
| 509-695, gnl|canFam2|chr18 (44995510-44994979) | |
| 509-695, gnl|dasNov1|scaffold_108544 (1869-2374) | |
| 509-695, gnl|echTel1|scaffold_306659 (10387-10018) | |
| 509-695, gnl|hg17|chr11 (47692885-47693377) | |
| 509-695, gnl|Hg17|chr11 (47693016-47693180) | |
| 509-695, gnl|loxAfr1|scaffold_794 (119266-118734) | |
| 509-695, gnl|mm7|chr2 (90634257-90633723) | |
| 509-695, gnl|Mm7|chr2 (90634110-90633911) | |
| 509-695, gnl|monDom2|scaffold_33 (13572352-13572942) | |
| 509-695, gnl|panTro1|chr9 (48220878-48221371) | |
| 509-695, gnl|rheMac2|chr14 (24392113-24391633) | |
| 509-695, gnl|rn3|chr3 (75040585-75040069) |