Non-Coding RNA Search

mCP1-MI-P-CP1-nzd-i-19-0-UI.s1

Sequence:


               
               TGAGTCTAGCTCCTTCCCCCTGTGCCATTTCGTCTTCCAGGACCGAGGACTCGGCGGTCT
TGTCCAGGCTCTCCTCCGCATCGCTGCCTTCCGCGTTCTCTTCTTCCTGGAAGGCACCCC
CCTCGGCCTTGTCGGGAGCCTTTTCTTCGCCGGAGCCCACGGCATTCTGAAGTCCTGCCA
GTGCGGGGAAGCCGGGCAGTGTCAATCCCCCCAGTCCTGGAGGTAGAAACATGGATGGGT
AGAAGAGGCCCGGGGCCATGGTGGACAGGAGGAAGGGGTTGAAGGCGAGCGGGCTGGAGG
GCAGGCCGGCCGGGCCCGGAGCAGCACCCACGGAGCCATTGGCAGAGTCGGGAGCCGGGG
CGGCGTCTGTGCTTTTCTCGGAGTCCTTGTTCTCGTCCTCGTGCTCGGCGCCCTTCTCGT
CCGCCTTCGAAGTGCCGTCGTCCGCCTCTCCCGGGCCGGCCGCGGGGGCTGAGGTGCCGG
CGGCGGCCGACAGCGGGGTGTTGAGAAGCCCGCCCAGGCCGAAGACACTGGGTAGGCCGG
CCACGCCGGGCAGCATCAGGGGCAGCACGGCCGCCGGGTTCTTGGTGTCACCTCCNGGCG
GCGGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGTCTAGCTCCTTCCCCCTGTGCCATTTCGTCTTCCAGGACCGAGGACTCGGCGGTCT
TGTCCAGGCTCTCCTCCGCATCGCTGCCTTCCGCGTTCTCTTCTTCCTGGAAGGCACCCC
CCTCGGCCTTGTCGGGAGCCTTTTCTTCGCCGGAGCCCACGGCATTCTGAAGTCCTGCCA
GTGCGGGGAAGCCGGGCAGTGTCAATCCCCCCAGTCCTGGAGGTAGAAACATGGATGGGT
AGAAGAGGCCCGGGGCCATGGTGGACAGGAGGAAGGGGTTGAAGGCGAGCGGGCTGGAGG
GCAGGCCGGCCGGGCCCGGAGCAGCACCCACGGAGCCATTGGCAGAGTCGGGAGCCGGGG
CGGCGTCTGTGCTTTTCTCGGAGTCCTTGTTCTCGTCCTCGTGCTCGGCGCCCTTCTCGT
CCGCCTTCGAAGTGCCGTCGTCCGCCTCTCCCGGGCCGGCCGCGGGGGCTGAGGTGCCGG
CGGCGGCCGACAGCGGGGTGTTGAGAAGCCCGCCCAGGCCGAAGACACTGGGTAGGCCGG
CCACGCCGGGCAGCATCAGGGGCAGCACGGCCGCCGGGTTCTTGGTGTCACCTCCNGGCG
GCGGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               2-120, + strand, RNAz p=0.651482

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-120, + strand, RNAz p=0.651482

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-610, gnl|bosTau2|chr14 (14891524-14892130)
               

               
               2-610, gnl|Hg17|chr8 (61941000-61940394)
               

               
               2-610, gnl|Mm7|chr4 (8793756-8793150)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-610, gnl|bosTau2|chr14 (14891524-14892130)
               

               
               2-610, gnl|Hg17|chr8 (61941000-61940394)
               

               
               2-610, gnl|Mm7|chr4 (8793756-8793150)

	2-610, gnl\|bosTau2\|chr14 (14891524-14892130)
	2-610, gnl\|Hg17\|chr8 (61941000-61940394)
	2-610, gnl\|Mm7\|chr4 (8793756-8793150)