mE3-MI-P-E3-aal-g-12-1-UM.s1
|
TCCCCACTCCCGCTCCCCCCCTCGCCACTCCCAAGGTGAACCCCCACGGCACGAAGGTGC
CCCACTCCCCCAGTGACGCCCTGAAACATCTTGACAGCCTCAAGGGCACCCTTGATAACC
TGAGCGAGCTGCACTGTGACCAGCTGCACGTGGATCCTGAGAACTTCAGGCTCCTGGGCA
ACGTGATAGTGGTTGTTCTGGCTCCCCGCCTTGACCATGACTTCAACCCGGATGTGCAGG
CTGCTTTTCAGAAGGTGGTGCCTGGTGTGGCCAATGCCCTGGCCCACAAGTACCACTAAG
TTCCCCTTCCTGATTTCCAGGAGGAGCCCTTTTTCCTCTGAACCCAAAAACTGGATATGG
AAATATTATGAAGAGTTTTGAGCATCTGGCCTCTGCGTAATAAAAACATTATTTTCATTG
CAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCCCCACTCCCGCTCCCCCCCTCGCCACTCCCAAGGTGAACCCCCACGGCACGAAGGTGC
CCCACTCCCCCAGTGACGCCCTGAAACATCTTGACAGCCTCAAGGGCACCCTTGATAACC
TGAGCGAGCTGCACTGTGACCAGCTGCACGTGGATCCTGAGAACTTCAGGCTCCTGGGCA
ACGTGATAGTGGTTGTTCTGGCTCCCCGCCTTGACCATGACTTCAACCCGGATGTGCAGG
CTGCTTTTCAGAAGGTGGTGCCTGGTGTGGCCAATGCCCTGGCCCACAAGTACCACTAAG
TTCCCCTTCCTGATTTCCAGGAGGAGCCCTTTTTCCTCTGAACCCAAAAACTGGATATGG
AAATATTATGAAGAGTTTTGAGCATCTGGCCTCTGCGTAATAAAAACATTATTTTCATTG
CAAAAAAAAAAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
30-168, gnl|bosTau2|chr15 (31548053-31548191) |
|
30-168, gnl|canFam2|chr21 (31297816-31297969) |
|
30-168, gnl|danRer3|chr14 (52027702-52027855) |
|
30-168, gnl|dasNov1|scaffold_13030 (34989-34836) |
|
30-168, gnl|echTel1|scaffold_291727 (50072-49919) |
|
30-168, gnl|fr1|chrUn (269727330-269727483) |
|
30-168, gnl|galGal2|chr1 (188136630-188136477) |
|
30-168, gnl|hg17|chr11 (5204379-5204532) |
|
30-168, gnl|Hg17|chr11 (5204523-5204385) |
|
30-168, gnl|loxAfr1|scaffold_3994 (95353-95200) |
|
30-168, gnl|mm7|chr7 (99864254-99864406) |
|
30-168, gnl|Mm7|chr7 (99883567-99883429) |
|
30-168, gnl|monDom2|scaffold_111 (1430434-1430587) |
|
30-168, gnl|oryCun1|scaffold_212048 (55125-55278) |
|
30-168, gnl|panTro1|chr9 (5283210-5283363) |
|
30-168, gnl|rheMac2|chr14 (68175209-68175056) |
|
30-168, gnl|rn3|chr1 (161701009-161701162) |
|
30-168, gnl|tetNig1|chr2 (3548897-3548740) |
|
30-168, gnl|xenTro1|scaffold_289 (335758-335605) |
| |
|
170-422, gnl|bosTau2|chr15 (31549093-31549347) |
|
170-422, gnl|Mm7|chr7 (99882773-99882512) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
30-168, gnl|bosTau2|chr15 (31548053-31548191) |
|
30-168, gnl|canFam2|chr21 (31297816-31297969) |
|
30-168, gnl|danRer3|chr14 (52027702-52027855) |
|
30-168, gnl|dasNov1|scaffold_13030 (34989-34836) |
|
30-168, gnl|echTel1|scaffold_291727 (50072-49919) |
|
30-168, gnl|fr1|chrUn (269727330-269727483) |
|
30-168, gnl|galGal2|chr1 (188136630-188136477) |
|
30-168, gnl|hg17|chr11 (5204379-5204532) |
|
30-168, gnl|Hg17|chr11 (5204523-5204385) |
|
30-168, gnl|loxAfr1|scaffold_3994 (95353-95200) |
|
30-168, gnl|mm7|chr7 (99864254-99864406) |
|
30-168, gnl|Mm7|chr7 (99883567-99883429) |
|
30-168, gnl|monDom2|scaffold_111 (1430434-1430587) |
|
30-168, gnl|oryCun1|scaffold_212048 (55125-55278) |
|
30-168, gnl|panTro1|chr9 (5283210-5283363) |
|
30-168, gnl|rheMac2|chr14 (68175209-68175056) |
|
30-168, gnl|rn3|chr1 (161701009-161701162) |
|
30-168, gnl|tetNig1|chr2 (3548897-3548740) |
|
30-168, gnl|xenTro1|scaffold_289 (335758-335605) |
| |
|
170-422, gnl|bosTau2|chr15 (31549093-31549347) |
|
170-422, gnl|Mm7|chr7 (99882773-99882512) |
