Non-Coding RNA Search

mE3-MI-P-E3-agv-b-01-1-UM.s1

Sequence:


               
               AGGGGAAAAAAGCATTTGCTAAGTGTATCTCATGTGTTAATGATAGTGTTAAGTAATTTA
AATGAAATACTTCATTTAATCTTTGCCCAAACCTTCTAACAAGGGCTACTATGTATAGCT
GTCCCAATTTTAGGAAACATCATACCCATGAACTAAATATTCCAATTCTATTATCTCCAT
TTCCTCAGATGAGGAAACTGATGATTAAATATGTCACAGAGTGACCGTCAGGGTCATTAT
TCAAACTGAAGCCCACCTTAAACTAGAATTCATGTCCTTAATCACTATTTACACTGTTTT
TTCTAATTAGGAATTTTGCCAGTAATAGTTTAATGTTACACATTACCACATATGTGCTAA
AATTCCTTTGAAATGTGAAATAAGAAAATAAAATTCAGTAATTTTTTACTAAAGTAAATT
TCTGATTCCTCAATGGTGATCAGATTTCCATAAAGTTGAAAATCAAGTTTTAAGTGCTAA
AAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGGGAAAAAAGCATTTGCTAAGTGTATCTCATGTGTTAATGATAGTGTTAAGTAATTTA
AATGAAATACTTCATTTAATCTTTGCCCAAACCTTCTAACAAGGGCTACTATGTATAGCT
GTCCCAATTTTAGGAAACATCATACCCATGAACTAAATATTCCAATTCTATTATCTCCAT
TTCCTCAGATGAGGAAACTGATGATTAAATATGTCACAGAGTGACCGTCAGGGTCATTAT
TCAAACTGAAGCCCACCTTAAACTAGAATTCATGTCCTTAATCACTATTTACACTGTTTT
TTCTAATTAGGAATTTTGCCAGTAATAGTTTAATGTTACACATTACCACATATGTGCTAA
AATTCCTTTGAAATGTGAAATAAGAAAATAAAATTCAGTAATTTTTTACTAAAGTAAATT
TCTGATTCCTCAATGGTGATCAGATTTCCATAAAGTTGAAAATCAAGTTTTAAGTGCTAA
AAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               124-280, + strand, RNAz p=0.984699

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               124-280, + strand, RNAz p=0.984699

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

Help | Less info


               
               45-466, gnl|bosTau2|chrX (9637553-9637958)
               

               
               45-466, gnl|canFam2|chr27 (26578492-26578105)
               

               
               45-466, gnl|dasNov1|scaffold_12 (188801-189212)
               

               
               45-466, gnl|hg17|chr12 (23879747-23880149)
               

               
               45-466, gnl|Hg17|chr12 (23880214-23879774)
               

               
               45-466, gnl|mm7|chr6 (144201270-144201615)
               

               
               45-466, gnl|oryCun1|scaffold_193869 (12582-12226)
               

               
               45-466, gnl|panTro1|chrUn_random (50264689-50265091)
               

               
               45-466, gnl|rheMac2|chr11 (24100900-24101299)

Aligned organism(s): 9 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               45-466, gnl|bosTau2|chrX (9637553-9637958)
               

               
               45-466, gnl|canFam2|chr27 (26578492-26578105)
               

               
               45-466, gnl|dasNov1|scaffold_12 (188801-189212)
               

               
               45-466, gnl|hg17|chr12 (23879747-23880149)
               

               
               45-466, gnl|Hg17|chr12 (23880214-23879774)
               

               
               45-466, gnl|mm7|chr6 (144201270-144201615)
               

               
               45-466, gnl|oryCun1|scaffold_193869 (12582-12226)
               

               
               45-466, gnl|panTro1|chrUn_random (50264689-50265091)
               

               
               45-466, gnl|rheMac2|chr11 (24100900-24101299)

	45-466, gnl\|bosTau2\|chrX (9637553-9637958)
	45-466, gnl\|canFam2\|chr27 (26578492-26578105)
	45-466, gnl\|dasNov1\|scaffold_12 (188801-189212)
	45-466, gnl\|hg17\|chr12 (23879747-23880149)
	45-466, gnl\|Hg17\|chr12 (23880214-23879774)
	45-466, gnl\|mm7\|chr6 (144201270-144201615)
	45-466, gnl\|oryCun1\|scaffold_193869 (12582-12226)
	45-466, gnl\|panTro1\|chrUn_random (50264689-50265091)
	45-466, gnl\|rheMac2\|chr11 (24100900-24101299)