Non-Coding RNA Search

mE6-MI-P-E6-acf-d-02-1-UM.s1

Sequence:


               
               AGCTCCAACAAGTCCGCCAAATCCGGAAGAAGGTGATGGAAATCATGACCCGAGAGGTGC
AGACAAATGACTTGAAAGAGGTGGTCAATAAATTGATTCCCGACCGCATTGGAAAGGACA
TAGAAAAGGCTTGCCCGTTTATTTCTCCGCTTCATGAAGTTTTCGTTAGAAAAGTAAAAA
TGCTGAAGAAGCCCAAGTTTGAATTGGGAAAACTCATGGAGGTACATGGTGAAGGTAGTA
GTTTTGGAAAAGCTACTGGGGACGGGACAGGTGCTAAAGTTTAACGAGCTGATGGCTTTG
AGCCCCCAGTGCAAGGATCTGTTTAAAATTCAGATTTTTAATGGTGGCAAATAAAAGATT
TTATTTGTGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTCCAACAAGTCCGCCAAATCCGGAAGAAGGTGATGGAAATCATGACCCGAGAGGTGC
AGACAAATGACTTGAAAGAGGTGGTCAATAAATTGATTCCCGACCGCATTGGAAAGGACA
TAGAAAAGGCTTGCCCGTTTATTTCTCCGCTTCATGAAGTTTTCGTTAGAAAAGTAAAAA
TGCTGAAGAAGCCCAAGTTTGAATTGGGAAAACTCATGGAGGTACATGGTGAAGGTAGTA
GTTTTGGAAAAGCTACTGGGGACGGGACAGGTGCTAAAGTTTAACGAGCTGATGGCTTTG
AGCCCCCAGTGCAAGGATCTGTTTAAAATTCAGATTTTTAATGGTGGCAAATAAAAGATT
TTATTTGTGAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|45269041|gb|AAS55933.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|45269041|gb|AAS55933.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-240, + strand, RNAz p=0.62343

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-240, + strand, RNAz p=0.62343

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-384, gnl|bosTau2|chr13 (46751034-46750652)
               

               
               1-384, gnl|Hg17|chr7 (97660082-97659699)
               

               
               1-384, gnl|Mm7|chr14 (82841882-82841497)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-384, gnl|bosTau2|chr13 (46751034-46750652)
               

               
               1-384, gnl|Hg17|chr7 (97660082-97659699)
               

               
               1-384, gnl|Mm7|chr14 (82841882-82841497)

	1-384, gnl\|bosTau2\|chr13 (46751034-46750652)
	1-384, gnl\|Hg17\|chr7 (97660082-97659699)
	1-384, gnl\|Mm7\|chr14 (82841882-82841497)