mE6-MI-P-E6-ahj-h-09-1-UM.s1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAGGGCAACAGTTGGCAAACAAGTTACAGTGTCCTTTTGTAGATGTACCTGCTGGTACA TATCCTCGTAAATTTAATGAAACCCAAATAAAGCAAGCTCTAAGAGGAGTATTAGAATCA GTTAAACATAATTTAGATGTGGTGAGCCCAGTTCCCACCAATAAGGATGTATCAGAAGCT GACTTGAGAATTGTCATGTGTGCCATGTGTGGTGATCCATTTAGTGTGGATCTTATTCTT TCACCCTTCCTCGATTCTCATTCTTGTAGTGCTGCTCAAGCTGGACAGAATAATTCTCTA ATGCTTGATAAAATCATTGGTGAAAAAAGGAGACGAATACAGATCACAATATTATCATAT CATTCCTCAATTGGAGTGAGGAAAGATGAACTTGTTCATGGGTATATATTAGTTTATTCT GCCAAACGAAAAGCATCAATGGGAATGCTTCGAGCATTTCTTTCAGAAGTTCAGGACACT ATTCCTGTACAACTGGTGGCAGTTACTGACAGCCAAGCTGACTTTTTTGAAAATGAGGCC ATCAAGGAGTTAATGACTGAAGGAGAACACATCGCAACTGAGATCACTGCTAAATTTACA GCACTGTATTCTTTATCTCAGTATCATCGGCAAACTGAGGTCTTTACCTGTTTTTCAGTG ATGTTCTTGAGAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAGGGCAACAGTTGGCAAACAAGTTACAGTGTCCTTTTGTAGATGTACCTGCTGGTACA TATCCTCGTAAATTTAATGAAACCCAAATAAAGCAAGCTCTAAGAGGAGTATTAGAATCA GTTAAACATAATTTAGATGTGGTGAGCCCAGTTCCCACCAATAAGGATGTATCAGAAGCT GACTTGAGAATTGTCATGTGTGCCATGTGTGGTGATCCATTTAGTGTGGATCTTATTCTT TCACCCTTCCTCGATTCTCATTCTTGTAGTGCTGCTCAAGCTGGACAGAATAATTCTCTA ATGCTTGATAAAATCATTGGTGAAAAAAGGAGACGAATACAGATCACAATATTATCATAT CATTCCTCAATTGGAGTGAGGAAAGATGAACTTGTTCATGGGTATATATTAGTTTATTCT GCCAAACGAAAAGCATCAATGGGAATGCTTCGAGCATTTCTTTCAGAAGTTCAGGACACT ATTCCTGTACAACTGGTGGCAGTTACTGACAGCCAAGCTGACTTTTTTGAAAATGAGGCC ATCAAGGAGTTAATGACTGAAGGAGAACACATCGCAACTGAGATCACTGCTAAATTTACA GCACTGTATTCTTTATCTCAGTATCATCGGCAAACTGAGGTCTTTACCTGTTTTTCAGTG ATGTTCTTGAGAAAAAAAAAAAAAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 228-679, - strand, RNAz p=0.897845 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 228-679, - strand, RNAz p=0.897845 |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 228-679, gnl|bosTau2|chr21 (28150249-28149797) | |
| 228-679, gnl|canFam2|chr8 (14209555-14210059) | |
| 228-679, gnl|canFam2|chr8 (14209555-14209968) | |
| 228-679, gnl|danRer3|chr14 (42462250-42462753) | |
| 228-679, gnl|danRer3|chr14 (42462250-42462663) | |
| 228-679, gnl|dasNov1|scaffold_16162 (10242-10746) | |
| 228-679, gnl|dasNov1|scaffold_73261 (2818-3224) | |
| 228-679, gnl|echTel1|scaffold_317351 (48158-48662) | |
| 228-679, gnl|echTel1|scaffold_317351 (48158-48571) | |
| 228-679, gnl|fr1|chrUn (296741203-296741706) | |
| 228-679, gnl|fr1|chrUn (296741203-296741616) | |
| 228-679, gnl|galGal2|chr5 (31561837-31562341) | |
| 228-679, gnl|galGal2|chr5 (31561837-31562250) | |
| 228-679, gnl|hg17|chr14 (31632003-31632507) | |
| 228-679, gnl|Hg17|chr14 (31632002-31632454) | |
| 228-679, gnl|hg17|chr7 (54777951-54778363) | |
| 228-679, gnl|loxAfr1|scaffold_63445 (7787-7283) | |
| 228-679, gnl|loxAfr1|scaffold_63445 (7787-7374) | |
| 228-679, gnl|mm7|chr12 (50531477-50531981) | |
| 228-679, gnl|mm7|chr12 (50531477-50531890) | |
| 228-679, gnl|Mm7|chr12 (50531476-50531928) | |
| 228-679, gnl|monDom2|scaffold_53 (4979282-4979786) | |
| 228-679, gnl|monDom2|scaffold_53 (4979282-4979695) | |
| 228-679, gnl|oryCun1|scaffold_208819 (4079-3575) | |
| 228-679, gnl|oryCun1|scaffold_208819 (4079-3666) | |
| 228-679, gnl|panTro1|chr15 (30784645-30785149) | |
| 228-679, gnl|panTro1|chr6 (56480378-56480793) | |
| 228-679, gnl|rheMac2|chr3 (71405403-71404986) | |
| 228-679, gnl|rheMac2|chr7 (95033664-95034168) | |
| 228-679, gnl|rn3|chr6 (72690730-72691234) | |
| 228-679, gnl|rn3|chr6 (72690730-72691143) | |
| 228-679, gnl|tetNig1|chr10 (12760703-12761185) | |
| 228-679, gnl|tetNig1|chr10 (12760703-12761116) | |
| 228-679, gnl|xenTro1|scaffold_271 (1023196-1022692) | |
| 228-679, gnl|xenTro1|scaffold_271 (1023196-1022783) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 228-679, gnl|bosTau2|chr21 (28150249-28149797) | |
| 228-679, gnl|canFam2|chr8 (14209555-14210059) | |
| 228-679, gnl|canFam2|chr8 (14209555-14209968) | |
| 228-679, gnl|danRer3|chr14 (42462250-42462753) | |
| 228-679, gnl|danRer3|chr14 (42462250-42462663) | |
| 228-679, gnl|dasNov1|scaffold_16162 (10242-10746) | |
| 228-679, gnl|dasNov1|scaffold_73261 (2818-3224) | |
| 228-679, gnl|echTel1|scaffold_317351 (48158-48662) | |
| 228-679, gnl|echTel1|scaffold_317351 (48158-48571) | |
| 228-679, gnl|fr1|chrUn (296741203-296741706) | |
| 228-679, gnl|fr1|chrUn (296741203-296741616) | |
| 228-679, gnl|galGal2|chr5 (31561837-31562341) | |
| 228-679, gnl|galGal2|chr5 (31561837-31562250) | |
| 228-679, gnl|hg17|chr14 (31632003-31632507) | |
| 228-679, gnl|Hg17|chr14 (31632002-31632454) | |
| 228-679, gnl|hg17|chr7 (54777951-54778363) | |
| 228-679, gnl|loxAfr1|scaffold_63445 (7787-7283) | |
| 228-679, gnl|loxAfr1|scaffold_63445 (7787-7374) | |
| 228-679, gnl|mm7|chr12 (50531477-50531981) | |
| 228-679, gnl|mm7|chr12 (50531477-50531890) | |
| 228-679, gnl|Mm7|chr12 (50531476-50531928) | |
| 228-679, gnl|monDom2|scaffold_53 (4979282-4979786) | |
| 228-679, gnl|monDom2|scaffold_53 (4979282-4979695) | |
| 228-679, gnl|oryCun1|scaffold_208819 (4079-3575) | |
| 228-679, gnl|oryCun1|scaffold_208819 (4079-3666) | |
| 228-679, gnl|panTro1|chr15 (30784645-30785149) | |
| 228-679, gnl|panTro1|chr6 (56480378-56480793) | |
| 228-679, gnl|rheMac2|chr3 (71405403-71404986) | |
| 228-679, gnl|rheMac2|chr7 (95033664-95034168) | |
| 228-679, gnl|rn3|chr6 (72690730-72691234) | |
| 228-679, gnl|rn3|chr6 (72690730-72691143) | |
| 228-679, gnl|tetNig1|chr10 (12760703-12761185) | |
| 228-679, gnl|tetNig1|chr10 (12760703-12761116) | |
| 228-679, gnl|xenTro1|scaffold_271 (1023196-1022692) | |
| 228-679, gnl|xenTro1|scaffold_271 (1023196-1022783) |