Non-Coding RNA Search

mE6-MI-P-E6-ahk-g-05-1-UM.s1

Sequence:


               
               CGGACATACAAGACCCCCACCCACTGAGTAGGGGTTTGACATGCATGCTGGGGTGGTTCC
ACACAGTAGCCTTTTTTCTTCCAATCTTCCTCTTTTTTGCCTAAATGACTGTAGAGTACT
TGGATACAAAACACTGATTGTGTGCTTAATTATCTGGAGAGACAGGGTTGAGACCTTTAA
AGATGTGGCCCATTTTTTCCTTTGATAGACTTATATTTGTGTGGTTGAATGAAAACCAAC
AGCTCATTTTCCTGTGCTGAGGGAGAATTTGAGTTTGGCTAGCGCAATAAAAGGGATGGT
TGAAGAATAACCAAAAATTTGAAGCTCTCACTAAGACTTGTCCCTTTTAGAGTGTCCTTA
TTATTGTAAGTACACAGGTGTACCTGTGCTGGCATTTGCCACTGCTGAGGGGAACCATCC
CTGTGCTCAGGCATCTCCTGGCAGGATGTGTATGAAAAATTATTTTAGACATTCAAAGAT
AAGGCTTTATTTACTTCCTCAGGTTTAGACTAAAACGTATTCTACCTTCTAGGCAAACAA
AGCCCTTTGGTGTCTGGTTGTGTTTTGTTTGTTTTTTNTAAGTAATATAGTGTAATACAG
TCATCCTTATTACTTAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGACATACAAGACCCCCACCCACTGAGTAGGGGTTTGACATGCATGCTGGGGTGGTTCC
ACACAGTAGCCTTTTTTCTTCCAATCTTCCTCTTTTTTGCCTAAATGACTGTAGAGTACT
TGGATACAAAACACTGATTGTGTGCTTAATTATCTGGAGAGACAGGGTTGAGACCTTTAA
AGATGTGGCCCATTTTTTCCTTTGATAGACTTATATTTGTGTGGTTGAATGAAAACCAAC
AGCTCATTTTCCTGTGCTGAGGGAGAATTTGAGTTTGGCTAGCGCAATAAAAGGGATGGT
TGAAGAATAACCAAAAATTTGAAGCTCTCACTAAGACTTGTCCCTTTTAGAGTGTCCTTA
TTATTGTAAGTACACAGGTGTACCTGTGCTGGCATTTGCCACTGCTGAGGGGAACCATCC
CTGTGCTCAGGCATCTCCTGGCAGGATGTGTATGAAAAATTATTTTAGACATTCAAAGAT
AAGGCTTTATTTACTTCCTCAGGTTTAGACTAAAACGTATTCTACCTTCTAGGCAAACAA
AGCCCTTTGGTGTCTGGTTGTGTTTTGTTTGTTTTTTNTAAGTAATATAGTGTAATACAG
TCATCCTTATTACTTAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               457-573, - strand, RNAz p=0.970281

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               457-573, - strand, RNAz p=0.970281

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               3-207, gnl|bosTau2|chr5 (21638807-21638598)
               

               
               3-207, gnl|Hg17|chr12 (48433368-48433582)
               


               
               239-573, gnl|bosTau2|chr5 (21638598-21638257)
               

               
               239-573, gnl|Hg17|chr12 (48433582-48433877)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-207, gnl|bosTau2|chr5 (21638807-21638598)
               

               
               3-207, gnl|Hg17|chr12 (48433368-48433582)
               


               
               239-573, gnl|bosTau2|chr5 (21638598-21638257)
               

               
               239-573, gnl|Hg17|chr12 (48433582-48433877)

	3-207, gnl\|bosTau2\|chr5 (21638807-21638598)
	3-207, gnl\|Hg17\|chr12 (48433368-48433582)

	239-573, gnl\|bosTau2\|chr5 (21638598-21638257)
	239-573, gnl\|Hg17\|chr12 (48433582-48433877)