Non-Coding RNA Search

mE6-MI-P-E6-ahm-a-12-1-UM.s1

Sequence:


               
               AAAATGAGGTTGATCGCAGCATTCAGAAAGTATATAAGACCTACAATGGAACCAATCCGG
ATGCTGCTAGCCGGGCTATTGATTATGTACAGAGACAGGTGAGTTCTCTTGAAGTTAATC
TGTTTTTGAGGACAAATCACTGTTGAGTCAACATTAAACTTAACTCTATTACTATATAAA
TTAGCAATGTACCTTTGCAACTGTGGGTTAGCTTCATGATGCATCCAGTGTTTTTTACCT
TCACCCTTGAAAAGTTTTTTTCCACCATTGTCCAGTCATAGCCAGATAAGAAGCATCTCA
CTTCTCCCCCCAAGAAATAACTAGCTGGAAAGGTGATAATGGAAGAGAGGTATGTGTCAC
TGGAAAGTTGAGAGTCCAGATGGACTTCAGAGGAGGTGAGAAGTCTTCATACACCTTAGG
AAAGTAAGACGAGAAAAGGGAACAGACAAAACTGTTAAAAAAAATTAGTATAGGCAATTG
AAACACGTGTGGAGGTAAAAACGCGTGGAGGTAGAATCGTATGGCAGATCTTTGTATCCA
TAAACCCACCTCAAAAGTTGTCAGCTATTGTCAATCTTGTTTCATCTATTACTCCCACAT
TCTTTTGCTAGATTAAAGTAAACCTAAAACATTTCAGACAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATGAGGTTGATCGCAGCATTCAGAAAGTATATAAGACCTACAATGGAACCAATCCGG
ATGCTGCTAGCCGGGCTATTGATTATGTACAGAGACAGGTGAGTTCTCTTGAAGTTAATC
TGTTTTTGAGGACAAATCACTGTTGAGTCAACATTAAACTTAACTCTATTACTATATAAA
TTAGCAATGTACCTTTGCAACTGTGGGTTAGCTTCATGATGCATCCAGTGTTTTTTACCT
TCACCCTTGAAAAGTTTTTTTCCACCATTGTCCAGTCATAGCCAGATAAGAAGCATCTCA
CTTCTCCCCCCAAGAAATAACTAGCTGGAAAGGTGATAATGGAAGAGAGGTATGTGTCAC
TGGAAAGTTGAGAGTCCAGATGGACTTCAGAGGAGGTGAGAAGTCTTCATACACCTTAGG
AAAGTAAGACGAGAAAAGGGAACAGACAAAACTGTTAAAAAAAATTAGTATAGGCAATTG
AAACACGTGTGGAGGTAAAAACGCGTGGAGGTAGAATCGTATGGCAGATCTTTGTATCCA
TAAACCCACCTCAAAAGTTGTCAGCTATTGTCAATCTTGTTTCATCTATTACTCCCACAT
TCTTTTGCTAGATTAAAGTAAACCTAAAACATTTCAGACAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               364-482, - strand, RNAz p=0.822588

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               364-482, - strand, RNAz p=0.822588

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-590, gnl|bosTau2|chr21 (21537559-21536986)
               

               
               1-590, gnl|Hg17|chr15 (75133672-75133066)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-590, gnl|bosTau2|chr21 (21537559-21536986)
               

               
               1-590, gnl|Hg17|chr15 (75133672-75133066)

	1-590, gnl\|bosTau2\|chr21 (21537559-21536986)
	1-590, gnl\|Hg17\|chr15 (75133672-75133066)