Non-Coding RNA Search

mE7-MI-P-E7-aia-g-08-1-UM.s1

Sequence:


               
               ATTCAATGGACCCTTCAGCCCTAAATGCCTCGTGTGGTGTACACAGGCCAGACAGAACTA
CATCATAGCTCCTTGGCAGTCGTTTTGCACTGAGCAACTGTTAGGGAGGGTAGCCTGCGA
AACTCTGTCTCTGCTGGGAAGGCTTCAGTTCGCCATCCCTATCTAAAAAGCATCTCTTAA
GGTGCTTTCCACCCTCAACTACTTTATAAACTTTTCTATAATATCTTCGAACCACGACCG
TCTGACTGCTCAGCTCATTGGGCATAAAACTGCAATGTGTGGCTCCCTCGACACCGACAG
CCCTTGAACCCCAACTAGAAAGCTGGGTCTAGTGAAAAACAGGACCCACCCGTCTCACAC
TGGAGAAATTCTTTTTCCCGCACTTTTCCCCAATAAAGAGCGTTCGAGGGCAAATGGACG
TCTCCCGACAACCTGGCGCGGAAGAGCGGCCGGGCCGGGCCCTACCTGGTTGAAGTGCAG
CTGCCCGAGCTCGGGGGCGCCCTCCACGGGGCCGGCTCCCAGCTGCTCCAACAAGCGCCG
GAGCTGCGCCGCCGACAGGCTCCTGTTCGCGCCGAACACGCTCAGCACATCCTCGCTGAA
GGCGAGCTCGGGCCCCGCATCTCTCCTCCGAGGCCGGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCAATGGACCCTTCAGCCCTAAATGCCTCGTGTGGTGTACACAGGCCAGACAGAACTA
CATCATAGCTCCTTGGCAGTCGTTTTGCACTGAGCAACTGTTAGGGAGGGTAGCCTGCGA
AACTCTGTCTCTGCTGGGAAGGCTTCAGTTCGCCATCCCTATCTAAAAAGCATCTCTTAA
GGTGCTTTCCACCCTCAACTACTTTATAAACTTTTCTATAATATCTTCGAACCACGACCG
TCTGACTGCTCAGCTCATTGGGCATAAAACTGCAATGTGTGGCTCCCTCGACACCGACAG
CCCTTGAACCCCAACTAGAAAGCTGGGTCTAGTGAAAAACAGGACCCACCCGTCTCACAC
TGGAGAAATTCTTTTTCCCGCACTTTTCCCCAATAAAGAGCGTTCGAGGGCAAATGGACG
TCTCCCGACAACCTGGCGCGGAAGAGCGGCCGGGCCGGGCCCTACCTGGTTGAAGTGCAG
CTGCCCGAGCTCGGGGGCGCCCTCCACGGGGCCGGCTCCCAGCTGCTCCAACAAGCGCCG
GAGCTGCGCCGCCGACAGGCTCCTGTTCGCGCCGAACACGCTCAGCACATCCTCGCTGAA
GGCGAGCTCGGGCCCCGCATCTCTCCTCCGAGGCCGGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-131, + strand, RNAz p=0.91659

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-131, + strand, RNAz p=0.91659

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-644, gnl|bosTau2|chr6 (7491079-7490415)
               

               
               1-644, gnl|Hg17|chr4 (103622266-103622958)
               

               
               1-644, gnl|Mm7|chr3 (135621477-135620855)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-644, gnl|bosTau2|chr6 (7491079-7490415)
               

               
               1-644, gnl|Hg17|chr4 (103622266-103622958)
               

               
               1-644, gnl|Mm7|chr3 (135621477-135620855)

	1-644, gnl\|bosTau2\|chr6 (7491079-7490415)
	1-644, gnl\|Hg17\|chr4 (103622266-103622958)
	1-644, gnl\|Mm7\|chr3 (135621477-135620855)