mH0-MI-P-HO-ahu-e-02-1-UM.s1
|
AGTGAAATTTAAGAAGGGAAATTGAAGGAGGTCTTTATGAACTCCAATTTCTTCCAGCGG
CCTTTAGCAGACAGCAACTCTGTCTGGGCCAATAAGTGGAGGAAAATAAGTCAGAAATTT
TGTTAACATTTTGCTCTAAATGTTAATGGCAAAATGCAAGGCGGTTTACAAATCTGCTTA
AGAGTGAGTGCATCATGGTgttcccgtcgtggtgcagtggttaaggaatccgactaggaa
ccatgaggttgcggtccctggccttgctcagtgggttaaaggatctggcgttgccctgag
ctgtggtgtaggttgcagacacggctcggatcccacgttgcGCCGAGGGAGCGGCCCAAG
AAATAGCAAAAAGACAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AGTGAAATTTAAGAAGGGAAATTGAAGGAGGTCTTTATGAACTCCAATTTCTTCCAGCGG
CCTTTAGCAGACAGCAACTCTGTCTGGGCCAATAAGTGGAGGAAAATAAGTCAGAAATTT
TGTTAACATTTTGCTCTAAATGTTAATGGCAAAATGCAAGGCGGTTTACAAATCTGCTTA
AGAGTGAGTGCATCATGGTgttcccgtcgtggtgcagtggttaaggaatccgactaggaa
ccatgaggttgcggtccctggccttgctcagtgggttaaaggatctggcgttgccctgag
ctgtggtgtaggttgcagacacggctcggatcccacgttgcGCCGAGGGAGCGGCCCAAG
AAATAGCAAAAAGACAAAAAAAAAAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
5-193, gnl|bosTau2|chr3 (70788222-70788407) |
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5-193, gnl|canFam2|chr15 (18897778-18897556) |
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5-193, gnl|dasNov1|scaffold_1246 (154668-154891) |
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5-193, gnl|echTel1|scaffold_300074 (10010-9788) |
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5-193, gnl|galGal2|chr8 (20848435-20848625) |
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5-193, gnl|hg17|chr1 (44545656-44545880) |
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5-193, gnl|Hg17|chr1 (44545708-44545894) |
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5-193, gnl|loxAfr1|scaffold_635 (157084-157307) |
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5-193, gnl|mm7|chr4 (116867852-116867627) |
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5-193, gnl|Mm7|chr4 (116867802-116867611) |
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5-193, gnl|monDom2|scaffold_70 (8381001-8380793) |
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5-193, gnl|oryCun1|scaffold_107404 (22957-22594) |
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5-193, gnl|panTro1|chr1_random (64370790-64370566) |
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5-193, gnl|rheMac2|chr1 (47334971-47335195) |
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5-193, gnl|rn3|chr5 (137785659-137785437) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
5-193, gnl|bosTau2|chr3 (70788222-70788407) |
|
5-193, gnl|canFam2|chr15 (18897778-18897556) |
|
5-193, gnl|dasNov1|scaffold_1246 (154668-154891) |
|
5-193, gnl|echTel1|scaffold_300074 (10010-9788) |
|
5-193, gnl|galGal2|chr8 (20848435-20848625) |
|
5-193, gnl|hg17|chr1 (44545656-44545880) |
|
5-193, gnl|Hg17|chr1 (44545708-44545894) |
|
5-193, gnl|loxAfr1|scaffold_635 (157084-157307) |
|
5-193, gnl|mm7|chr4 (116867852-116867627) |
|
5-193, gnl|Mm7|chr4 (116867802-116867611) |
|
5-193, gnl|monDom2|scaffold_70 (8381001-8380793) |
|
5-193, gnl|oryCun1|scaffold_107404 (22957-22594) |
|
5-193, gnl|panTro1|chr1_random (64370790-64370566) |
|
5-193, gnl|rheMac2|chr1 (47334971-47335195) |
|
5-193, gnl|rn3|chr5 (137785659-137785437) |
