mH3-MI-P-H3-aau-c-08-1-UM.s1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCCCAAGATTTCCCCCAGGACCCGGGAGGCGCTCCCCCCAGGCCCGACGGGAAGGTTT TCCAATTTTTTAATGCAAAATGTGAGTCCGCGTTCCTTTCCAAGAGGAATCCTCGGCAGA TCAACTGGACTGTTTTTTCCAGAAGGAAGCCCAAAAAGGGCCCGTCGGAAGAGATTCAGA AGAAAAGAACCCGTCGTGCAGTCAAATTCCAGAGGGCCATAACTGGTGCATCCCTTGCTG ACATAATGGCCCAGGGGAATCAGAAACCTGAAGTTTGGAAGGCTCAAAGAGAACAAGCTT TCAGGGCTTCCAAGGAAGCAAAAAAAGCTAAGCAAGCATTTAAAAAGACAGCAATGGCTT CTGCAAAGGCTCCCCCAAAGGCAGCCCCTAAGCAAAAGGTTTTGAAGCCTTTGAAGGTTT TTGCTCCCCGAGTTGGTGGAAAACGCTAAGTTGGAAGATCCGACTTTTAAATAAAGATCT GGCTTTAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCCCAAGATTTCCCCCAGGACCCGGGAGGCGCTCCCCCCAGGCCCGACGGGAAGGTTT TCCAATTTTTTAATGCAAAATGTGAGTCCGCGTTCCTTTCCAAGAGGAATCCTCGGCAGA TCAACTGGACTGTTTTTTCCAGAAGGAAGCCCAAAAAGGGCCCGTCGGAAGAGATTCAGA AGAAAAGAACCCGTCGTGCAGTCAAATTCCAGAGGGCCATAACTGGTGCATCCCTTGCTG ACATAATGGCCCAGGGGAATCAGAAACCTGAAGTTTGGAAGGCTCAAAGAGAACAAGCTT TCAGGGCTTCCAAGGAAGCAAAAAAAGCTAAGCAAGCATTTAAAAAGACAGCAATGGCTT CTGCAAAGGCTCCCCCAAAGGCAGCCCCTAAGCAAAAGGTTTTGAAGCCTTTGAAGGTTT TTGCTCCCCGAGTTGGTGGAAAACGCTAAGTTGGAAGATCCGACTTTTAAATAAAGATCT GGCTTTAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 200-359, - strand, RNAz p=0.573953 | |
| 390-499, + strand, RNAz p=0.762037 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 200-359, - strand, RNAz p=0.573953 | |
| 390-499, + strand, RNAz p=0.762037 |
| Aligned organism(s): 55 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
| 1-499, gnl|bosTau2|chr27 (24450970-24451459) | |
| 1-499, gnl|Hg17|chr9 (70061729-70062144) | |
| 1-499, gnl|Mm7|chr9 (115713363-115712860) | |
| 167-305, gnl|bosTau2|chr11 (21707668-21707806) | |
| 167-305, gnl|canFam2|chr33 (11035917-11036074) | |
| 167-305, gnl|canFam2|chr33 (11035921-11036057) | |
| 167-305, gnl|danRer3|chrNA (62952454-62952608) | |
| 167-305, gnl|danRer3|chrNA (62952458-62952596) | |
| 167-305, gnl|dasNov1|scaffold_17761 (10654-10499) | |
| 167-305, gnl|dasNov1|scaffold_17761 (10646-10511) | |
| 167-305, gnl|echTel1|scaffold_170056 (6240-6101) | |
| 167-305, gnl|echTel1|scaffold_321519 (48275-48411) | |
| 167-305, gnl|fr1|chrUn (203894609-203894767) | |
| 167-305, gnl|fr1|chrUn (203894613-203894739) | |
| 167-305, gnl|galGal2|chr1 (79434490-79434656) | |
| 167-305, gnl|hg17|chr3 (102884301-102884459) | |
| 167-305, gnl|Hg17|chr3 (102884442-102884304) | |
| 167-305, gnl|hg17|chrX_random (212621-212757) | |
| 167-305, gnl|loxAfr1|scaffold_46620 (12608-12474) | |
| 167-305, gnl|loxAfr1|scaffold_46620 (12604-12476) | |
| 167-305, gnl|mm7|chr16 (55824716-55824558) | |
| 167-305, gnl|Mm7|chr16 (55824573-55824711) | |
| 167-305, gnl|mm7|chr9 (115713062-115713201) | |
| 167-305, gnl|monDom2|scaffold_16 (33841708-33841569) | |
| 167-305, gnl|monDom2|scaffold_50 (8718375-8718224) | |
| 167-305, gnl|oryCun1|scaffold_138926 (27589-27728) | |
| 167-305, gnl|oryCun1|scaffold_187422 (4454-4621) | |
| 167-305, gnl|panTro1|chr2 (104363775-104363933) | |
| 167-305, gnl|panTro1|chrX (3652090-3651954) | |
| 167-305, gnl|rheMac2|chr2 (21872113-21872271) | |
| 167-305, gnl|rheMac2|chrX (1566649-1566513) | |
| 167-305, gnl|rn3|chr11 (45688224-45688382) | |
| 167-305, gnl|rn3|chr5 (25298891-25298752) | |
| 167-305, gnl|tetNig1|chr2 (9270135-9269991) | |
| 167-305, gnl|tetNig1|chr2 (9270131-9269992) | |
| 167-305, gnl|xenTro1|scaffold_9206 (7561-7719) | |
| 367-488, gnl|bosTau2|chr11 (21709537-21709658) | |
| 367-488, gnl|canFam2|chr33 (11034027-11034159) | |
| 367-488, gnl|danRer3|chrNA (62948644-62948769) | |
| 367-488, gnl|dasNov1|scaffold_17761 (11789-11656) | |
| 367-488, gnl|echTel1|scaffold_321519 (48092-48214) | |
| 367-488, gnl|fr1|chrUn (203894069-203894207) | |
| 367-488, gnl|galGal2|chr1 (79433415-79433553) | |
| 367-488, gnl|hg17|chr3 (102882631-102882764) | |
| 367-488, gnl|Hg17|chr3 (102882751-102882630) | |
| 367-488, gnl|loxAfr1|scaffold_46620 (13892-13759) | |
| 367-488, gnl|mm7|chr16 (55826495-55826350) | |
| 367-488, gnl|Mm7|chr16 (55826373-55826494) | |
| 367-488, gnl|monDom2|scaffold_50 (8719948-8719807) | |
| 367-488, gnl|oryCun1|scaffold_138926 (27403-27524) | |
| 367-488, gnl|panTro1|chr2 (104362110-104362243) | |
| 367-488, gnl|rheMac2|chr2 (21870429-21870562) | |
| 367-488, gnl|rn3|chr11 (45686435-45686565) | |
| 367-488, gnl|tetNig1|chr2 (9270760-9270645) | |
| 367-488, gnl|xenTro1|scaffold_60 (7045-6891) |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-499, gnl|bosTau2|chr27 (24450970-24451459) | |
| 1-499, gnl|Hg17|chr9 (70061729-70062144) | |
| 1-499, gnl|Mm7|chr9 (115713363-115712860) | |
| 167-305, gnl|bosTau2|chr11 (21707668-21707806) | |
| 167-305, gnl|canFam2|chr33 (11035917-11036074) | |
| 167-305, gnl|canFam2|chr33 (11035921-11036057) | |
| 167-305, gnl|danRer3|chrNA (62952454-62952608) | |
| 167-305, gnl|danRer3|chrNA (62952458-62952596) | |
| 167-305, gnl|dasNov1|scaffold_17761 (10654-10499) | |
| 167-305, gnl|dasNov1|scaffold_17761 (10646-10511) | |
| 167-305, gnl|echTel1|scaffold_170056 (6240-6101) | |
| 167-305, gnl|echTel1|scaffold_321519 (48275-48411) | |
| 167-305, gnl|fr1|chrUn (203894609-203894767) | |
| 167-305, gnl|fr1|chrUn (203894613-203894739) | |
| 167-305, gnl|galGal2|chr1 (79434490-79434656) | |
| 167-305, gnl|hg17|chr3 (102884301-102884459) | |
| 167-305, gnl|Hg17|chr3 (102884442-102884304) | |
| 167-305, gnl|hg17|chrX_random (212621-212757) | |
| 167-305, gnl|loxAfr1|scaffold_46620 (12608-12474) | |
| 167-305, gnl|loxAfr1|scaffold_46620 (12604-12476) | |
| 167-305, gnl|mm7|chr16 (55824716-55824558) | |
| 167-305, gnl|Mm7|chr16 (55824573-55824711) | |
| 167-305, gnl|mm7|chr9 (115713062-115713201) | |
| 167-305, gnl|monDom2|scaffold_16 (33841708-33841569) | |
| 167-305, gnl|monDom2|scaffold_50 (8718375-8718224) | |
| 167-305, gnl|oryCun1|scaffold_138926 (27589-27728) | |
| 167-305, gnl|oryCun1|scaffold_187422 (4454-4621) | |
| 167-305, gnl|panTro1|chr2 (104363775-104363933) | |
| 167-305, gnl|panTro1|chrX (3652090-3651954) | |
| 167-305, gnl|rheMac2|chr2 (21872113-21872271) | |
| 167-305, gnl|rheMac2|chrX (1566649-1566513) | |
| 167-305, gnl|rn3|chr11 (45688224-45688382) | |
| 167-305, gnl|rn3|chr5 (25298891-25298752) | |
| 167-305, gnl|tetNig1|chr2 (9270135-9269991) | |
| 167-305, gnl|tetNig1|chr2 (9270131-9269992) | |
| 167-305, gnl|xenTro1|scaffold_9206 (7561-7719) | |
| 367-488, gnl|bosTau2|chr11 (21709537-21709658) | |
| 367-488, gnl|canFam2|chr33 (11034027-11034159) | |
| 367-488, gnl|danRer3|chrNA (62948644-62948769) | |
| 367-488, gnl|dasNov1|scaffold_17761 (11789-11656) | |
| 367-488, gnl|echTel1|scaffold_321519 (48092-48214) | |
| 367-488, gnl|fr1|chrUn (203894069-203894207) | |
| 367-488, gnl|galGal2|chr1 (79433415-79433553) | |
| 367-488, gnl|hg17|chr3 (102882631-102882764) | |
| 367-488, gnl|Hg17|chr3 (102882751-102882630) | |
| 367-488, gnl|loxAfr1|scaffold_46620 (13892-13759) | |
| 367-488, gnl|mm7|chr16 (55826495-55826350) | |
| 367-488, gnl|Mm7|chr16 (55826373-55826494) | |
| 367-488, gnl|monDom2|scaffold_50 (8719948-8719807) | |
| 367-488, gnl|oryCun1|scaffold_138926 (27403-27524) | |
| 367-488, gnl|panTro1|chr2 (104362110-104362243) | |
| 367-488, gnl|rheMac2|chr2 (21870429-21870562) | |
| 367-488, gnl|rn3|chr11 (45686435-45686565) | |
| 367-488, gnl|tetNig1|chr2 (9270760-9270645) | |
| 367-488, gnl|xenTro1|scaffold_60 (7045-6891) |