Non-Coding RNA Search

mH3-MI-P-H3-afj-d-04-1-UM.s1

Sequence:


               
               CAATTGTCTGGTTGGATGATCAAGGGCTTGGAAAAAACAAGACTAGAGATTGGTGACGAT
GTGGTCTGGCGAAGATAACATGGATGGATCTGTCAGAAGCGACCCAGAGGTGGAGGCTAC
TGTGTCCCACATGGATGCTGTCCAAAATGTCCTCACTGTGGAGGAAGTTCTCAATAACCA
GGTGGACATGATGACCTACCCAGTGGATGAGTTGATGCCTATCAGCTTCTTTCCCCAGCC
ACTCCTCAGCCTACTCAGGAATAAAGTGGTTTTAGAAGTAGGAATGGGGACCACTTGTCC
AAGTAAGGACTTAATAGCCCCTCCAAAGCTCAAGCAGCCACTGCTGCTGACAAAGAGTCT
AATTTCCAGAGTCCAATTTTGCAAATCTGATATCATACTGCAGTGGAGAGGACTAGACAT
CTCTATGTAAGCAAGCTGGTTATACTGGACTCCTTCCATCATGGAGGGGCACTGATTTGT
CCTCACTGGAATAAATGTATGTATTGGAATTGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATTGTCTGGTTGGATGATCAAGGGCTTGGAAAAAACAAGACTAGAGATTGGTGACGAT
GTGGTCTGGCGAAGATAACATGGATGGATCTGTCAGAAGCGACCCAGAGGTGGAGGCTAC
TGTGTCCCACATGGATGCTGTCCAAAATGTCCTCACTGTGGAGGAAGTTCTCAATAACCA
GGTGGACATGATGACCTACCCAGTGGATGAGTTGATGCCTATCAGCTTCTTTCCCCAGCC
ACTCCTCAGCCTACTCAGGAATAAAGTGGTTTTAGAAGTAGGAATGGGGACCACTTGTCC
AAGTAAGGACTTAATAGCCCCTCCAAAGCTCAAGCAGCCACTGCTGCTGACAAAGAGTCT
AATTTCCAGAGTCCAATTTTGCAAATCTGATATCATACTGCAGTGGAGAGGACTAGACAT
CTCTATGTAAGCAAGCTGGTTATACTGGACTCCTTCCATCATGGAGGGGCACTGATTTGT
CCTCACTGGAATAAATGTATGTATTGGAATTGAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               201-359, - strand, RNAz p=0.999414

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               201-359, - strand, RNAz p=0.999414

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               222-334, - strand, RNAmicro p=0.99353

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               222-334, - strand, RNAmicro p=0.99353

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-514, gnl|bosTau2|chr21 (21573273-21572757)
               

               
               2-514, gnl|Hg17|chr15 (75170365-75169855)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-514, gnl|bosTau2|chr21 (21573273-21572757)
               

               
               2-514, gnl|Hg17|chr15 (75170365-75169855)

	2-514, gnl\|bosTau2\|chr21 (21573273-21572757)
	2-514, gnl\|Hg17\|chr15 (75170365-75169855)