Non-Coding RNA Search

mO1-MI-P-O1-abf-e-01-1-UM.s1

Sequence:


               
               TTTCTGAAGAAAGCCATGTTATCTTGTTGGTTAGCACGATTATGCAAACAAGTTGCTCAG
TGACAGTTTGGCTCAATGGGAGAAGCCATGCAATAATATTGCATCCATTGCATAATTAAG
AGCTAGCTCATCGTAAGACTGAAGAAAAAGTGTGTAACTTTGTACAACTCATATTCCGTG
AAACTAAGCACTGTTTGTTGTCTTTGAGTTGAGATATATTGAAAAATTACAGTGCAAAAA
GTATCGTGGATCTAATTTGAAGAAGTTTTAATTATCTCATTGAAGAAAAGCCCAATTTTA
TTTTAAAAATTTACAGGATCAGTGTGGAATCACTATCTGAGCCATCATTATATTTATCAA
TTGGGAACACTTCTGTGTAACTGTTAAGTTATTTGAATTATGGGGATATCATTAGGATTT
GATTTAAATGAAAAAATAAATAATTTTGCTGCACTTATAAAGTAAATAATCTTTTGTGTC
AGGAATAAAGAATTGTTTACCTAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTGAAGAAAGCCATGTTATCTTGTTGGTTAGCACGATTATGCAAACAAGTTGCTCAG
TGACAGTTTGGCTCAATGGGAGAAGCCATGCAATAATATTGCATCCATTGCATAATTAAG
AGCTAGCTCATCGTAAGACTGAAGAAAAAGTGTGTAACTTTGTACAACTCATATTCCGTG
AAACTAAGCACTGTTTGTTGTCTTTGAGTTGAGATATATTGAAAAATTACAGTGCAAAAA
GTATCGTGGATCTAATTTGAAGAAGTTTTAATTATCTCATTGAAGAAAAGCCCAATTTTA
TTTTAAAAATTTACAGGATCAGTGTGGAATCACTATCTGAGCCATCATTATATTTATCAA
TTGGGAACACTTCTGTGTAACTGTTAAGTTATTTGAATTATGGGGATATCATTAGGATTT
GATTTAAATGAAAAAATAAATAATTTTGCTGCACTTATAAAGTAAATAATCTTTTGTGTC
AGGAATAAAGAATTGTTTACCTAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-118, - strand, RNAz p=0.556047

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-118, - strand, RNAz p=0.556047

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-516, gnl|bosTau2|chr6 (9382905-9383436)
               

               
               1-516, gnl|Hg17|chr4 (101206167-101205672)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-516, gnl|bosTau2|chr6 (9382905-9383436)
               

               
               1-516, gnl|Hg17|chr4 (101206167-101205672)

	1-516, gnl\|bosTau2\|chr6 (9382905-9383436)
	1-516, gnl\|Hg17\|chr4 (101206167-101205672)