Non-Coding RNA Search

mO1-MI-P-O1-adq-a-06-1-UM.s2

Sequence:


               
               TCCCCACTCCCCCCACCCCCATGCGATTCTGGACGCTGCAGTGTGTGACTCACTCGCAGC
CCATCCACTCTGTTCCAGCGAGAGGTTAATGCCTCAAGTAATCACTCTGACTTCTTCCAT
CACCACCTGTGGCTAGACACAGATGAGAGAGAACGAGATGATGCAGGCAACACACAAAGA
AAGAGACTCACGTAAGCAGAAGCCAAATAACCTTTTCCTGCACTTCCTTAATGAGCACTG
TGTTGTGCCAGAACATTGTGTTACCAGGCTTGATGTCTGGAGCCCAGCTGGGCTGGTAAA
GAATGGAAGCATAAAAAGTCAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCCACTCCCCCCACCCCCATGCGATTCTGGACGCTGCAGTGTGTGACTCACTCGCAGC
CCATCCACTCTGTTCCAGCGAGAGGTTAATGCCTCAAGTAATCACTCTGACTTCTTCCAT
CACCACCTGTGGCTAGACACAGATGAGAGAGAACGAGATGATGCAGGCAACACACAAAGA
AAGAGACTCACGTAAGCAGAAGCCAAATAACCTTTTCCTGCACTTCCTTAATGAGCACTG
TGTTGTGCCAGAACATTGTGTTACCAGGCTTGATGTCTGGAGCCCAGCTGGGCTGGTAAA
GAATGGAAGCATAAAAAGTCAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               213-313, + strand, RNAz p=0.639544

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               213-313, + strand, RNAz p=0.639544

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               16-313, gnl|bosTau2|chr11 (67193349-67193059)
               

               
               16-313, gnl|canFam2|chrX (94208125-94208822)
               

               
               16-313, gnl|dasNov1|scaffold_2731 (28138-27433)
               

               
               16-313, gnl|hg17|chrX (117935068-117935776)
               

               
               16-313, gnl|Hg17|chrX (117935267-117935555)
               

               
               16-313, gnl|mm7|chrX (31122901-31123646)
               

               
               16-313, gnl|Mm7|chrX (31123087-31123413)
               

               
               16-313, gnl|panTro1|chrX (121934012-121934720)
               

               
               16-313, gnl|rn3|chrX (8572517-8571691)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-313, gnl|bosTau2|chr11 (67193349-67193059)
               

               
               16-313, gnl|canFam2|chrX (94208125-94208822)
               

               
               16-313, gnl|dasNov1|scaffold_2731 (28138-27433)
               

               
               16-313, gnl|hg17|chrX (117935068-117935776)
               

               
               16-313, gnl|Hg17|chrX (117935267-117935555)
               

               
               16-313, gnl|mm7|chrX (31122901-31123646)
               

               
               16-313, gnl|Mm7|chrX (31123087-31123413)
               

               
               16-313, gnl|panTro1|chrX (121934012-121934720)
               

               
               16-313, gnl|rn3|chrX (8572517-8571691)

	16-313, gnl\|bosTau2\|chr11 (67193349-67193059)
	16-313, gnl\|canFam2\|chrX (94208125-94208822)
	16-313, gnl\|dasNov1\|scaffold_2731 (28138-27433)
	16-313, gnl\|hg17\|chrX (117935068-117935776)
	16-313, gnl\|Hg17\|chrX (117935267-117935555)
	16-313, gnl\|mm7\|chrX (31122901-31123646)
	16-313, gnl\|Mm7\|chrX (31123087-31123413)
	16-313, gnl\|panTro1\|chrX (121934012-121934720)
	16-313, gnl\|rn3\|chrX (8572517-8571691)