Non-Coding RNA Search

mO3-MI-P-O3-abb-d-07-1-UM.s1

Sequence:


               
               AGACTGAAGGAGCCCAAAGAACAACGTCAGCAACAGATTCCCAAGAGACGGAGGCTATCC
TCTCTGAGAGGATCTACCTCTAAGTCTGAGTCCAGTCAAAACTGAGATGTTTTGAGAATA
ACCAATAAACAACACCACATCTTCAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGACTGAAGGAGCCCAAAGAACAACGTCAGCAACAGATTCCCAAGAGACGGAGGCTATCC
TCTCTGAGAGGATCTACCTCTAAGTCTGAGTCCAGTCAAAACTGAGATGTTTTGAGAATA
ACCAATAAACAACACCACATCTTCAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               40-162, + strand, RNAz p=0.988643

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-162, + strand, RNAz p=0.988643

Aligned organism(s): 19 entry(ies)

More info

Aligned organism(s): 19 entry(ies)

Help | Less info


               
               1-162, gnl|bosTau2|chr14 (1889039-1889199)
               

               
               1-162, gnl|canFam2|chr20 (54306402-54306302)
               

               
               1-162, gnl|danRer3|chrUn (148000952-148001053)
               

               
               1-162, gnl|dasNov1|scaffold_104827 (2352-2451)
               

               
               1-162, gnl|echTel1|scaffold_240249 (3425-3328)
               

               
               1-162, gnl|fr1|chrUn (231445955-231446056)
               

               
               1-162, gnl|galGal2|chrZ (13542128-13542027)
               

               
               1-162, gnl|hg17|chr11 (111611298-111611398)
               

               
               1-162, gnl|Hg17|chr19 (12866593-12866741)
               

               
               1-162, gnl|loxAfr1|scaffold_18707 (7873-7975)
               

               
               1-162, gnl|mm7|chr17 (72778386-72778285)
               

               
               1-162, gnl|Mm7|chr17 (72778274-72778433)
               

               
               1-162, gnl|monDom2|scaffold_83 (5872172-5872071)
               

               
               1-162, gnl|oryCun1|scaffold_24454 (4770-4671)
               

               
               1-162, gnl|panTro1|chr9 (113620381-113620482)
               

               
               1-162, gnl|rheMac2|chr14 (110703075-110703176)
               

               
               1-162, gnl|rn3|chr17 (57928558-57928463)
               

               
               1-162, gnl|tetNig1|chr18 (2519857-2519760)
               

               
               1-162, gnl|xenTro1|scaffold_28 (326606-326508)

Aligned organism(s): 19 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-162, gnl|bosTau2|chr14 (1889039-1889199)
               

               
               1-162, gnl|canFam2|chr20 (54306402-54306302)
               

               
               1-162, gnl|danRer3|chrUn (148000952-148001053)
               

               
               1-162, gnl|dasNov1|scaffold_104827 (2352-2451)
               

               
               1-162, gnl|echTel1|scaffold_240249 (3425-3328)
               

               
               1-162, gnl|fr1|chrUn (231445955-231446056)
               

               
               1-162, gnl|galGal2|chrZ (13542128-13542027)
               

               
               1-162, gnl|hg17|chr11 (111611298-111611398)
               

               
               1-162, gnl|Hg17|chr19 (12866593-12866741)
               

               
               1-162, gnl|loxAfr1|scaffold_18707 (7873-7975)
               

               
               1-162, gnl|mm7|chr17 (72778386-72778285)
               

               
               1-162, gnl|Mm7|chr17 (72778274-72778433)
               

               
               1-162, gnl|monDom2|scaffold_83 (5872172-5872071)
               

               
               1-162, gnl|oryCun1|scaffold_24454 (4770-4671)
               

               
               1-162, gnl|panTro1|chr9 (113620381-113620482)
               

               
               1-162, gnl|rheMac2|chr14 (110703075-110703176)
               

               
               1-162, gnl|rn3|chr17 (57928558-57928463)
               

               
               1-162, gnl|tetNig1|chr18 (2519857-2519760)
               

               
               1-162, gnl|xenTro1|scaffold_28 (326606-326508)

	1-162, gnl\|bosTau2\|chr14 (1889039-1889199)
	1-162, gnl\|canFam2\|chr20 (54306402-54306302)
	1-162, gnl\|danRer3\|chrUn (148000952-148001053)
	1-162, gnl\|dasNov1\|scaffold_104827 (2352-2451)
	1-162, gnl\|echTel1\|scaffold_240249 (3425-3328)
	1-162, gnl\|fr1\|chrUn (231445955-231446056)
	1-162, gnl\|galGal2\|chrZ (13542128-13542027)
	1-162, gnl\|hg17\|chr11 (111611298-111611398)
	1-162, gnl\|Hg17\|chr19 (12866593-12866741)
	1-162, gnl\|loxAfr1\|scaffold_18707 (7873-7975)
	1-162, gnl\|mm7\|chr17 (72778386-72778285)
	1-162, gnl\|Mm7\|chr17 (72778274-72778433)
	1-162, gnl\|monDom2\|scaffold_83 (5872172-5872071)
	1-162, gnl\|oryCun1\|scaffold_24454 (4770-4671)
	1-162, gnl\|panTro1\|chr9 (113620381-113620482)
	1-162, gnl\|rheMac2\|chr14 (110703075-110703176)
	1-162, gnl\|rn3\|chr17 (57928558-57928463)
	1-162, gnl\|tetNig1\|chr18 (2519857-2519760)
	1-162, gnl\|xenTro1\|scaffold_28 (326606-326508)