Non-Coding RNA Search

mO3-MI-P-O3-abb-f-10-1-UM.s1

Sequence:


               
               GTTGGCATTACTTACCAGCCCCCCACTGTGTTCCCCGGTGGAGACCTGCTCAAAGTACAG
CGGGCAGTGTGCATGCTGAGCAACACCACANCCATCGCTGAGGCCTGGGCTCGCCTGGAC
CACAAGTTTGACCTGATGTCTGCCAAGCGTGCCTTTGTTCACTGGTACGTGGGTGAGGGC
ATGGAGGAAGGAGAGTTTTCTGAGGCCCGTGAGGACATGGCTGCCCTTGAGAAGGATTAC
GAGGAGGTTGGTGTGGATTCTGTTGAAGGAGAGGGAGAGGAAGAAGGCGAGGACTACTAA
AGTTAAAATGTCACAAAGGTGCTGCTTTTACAGGGAAGCTTCTTCTGTTTTAAACATTGA
AAAGTTGTGGTCTGATCAGTTAATTTGTATGTAGCAGTGAATACTCTNATATACAATTAC
TGACCTATGCTTTAAAACACGACGCTTTGTTACAGACCCAAGTTATTCATTTCTCCTGGG
TTTGAATAAAGTATTCCCTGTCTTAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGGCATTACTTACCAGCCCCCCACTGTGTTCCCCGGTGGAGACCTGCTCAAAGTACAG
CGGGCAGTGTGCATGCTGAGCAACACCACANCCATCGCTGAGGCCTGGGCTCGCCTGGAC
CACAAGTTTGACCTGATGTCTGCCAAGCGTGCCTTTGTTCACTGGTACGTGGGTGAGGGC
ATGGAGGAAGGAGAGTTTTCTGAGGCCCGTGAGGACATGGCTGCCCTTGAGAAGGATTAC
GAGGAGGTTGGTGTGGATTCTGTTGAAGGAGAGGGAGAGGAAGAAGGCGAGGACTACTAA
AGTTAAAATGTCACAAAGGTGCTGCTTTTACAGGGAAGCTTCTTCTGTTTTAAACATTGA
AAAGTTGTGGTCTGATCAGTTAATTTGTATGTAGCAGTGAATACTCTNATATACAATTAC
TGACCTATGCTTTAAAACACGACGCTTTGTTACAGACCCAAGTTATTCATTTCTCCTGGG
TTTGAATAAAGTATTCCCTGTCTTAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55775|emb|CAA24536.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55775|emb|CAA24536.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               357-475, - strand, RNAz p=0.939307

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               357-475, - strand, RNAz p=0.939307

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-521, gnl|bosTau2|chr10 (46592733-46592214)
               

               
               1-521, gnl|Hg17|chr12 (47865359-47864845)
               

               
               1-521, gnl|Mm7|chr15 (98935593-98935096)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-521, gnl|bosTau2|chr10 (46592733-46592214)
               

               
               1-521, gnl|Hg17|chr12 (47865359-47864845)
               

               
               1-521, gnl|Mm7|chr15 (98935593-98935096)

	1-521, gnl\|bosTau2\|chr10 (46592733-46592214)
	1-521, gnl\|Hg17\|chr12 (47865359-47864845)
	1-521, gnl\|Mm7\|chr15 (98935593-98935096)