Non-Coding RNA Search

mO3-MI-P-O3-abc-e-01-1-UM.s1

Sequence:


               
               CTGGTCCTGCGACCCACGACCACATCGATCTGGGGATCAAAAATGACCCAAGCATTCGCA
TCTACGGCCTGGACTTCTACGTGCTGCTGGGTAGCCCAGGTTTCAGCATCGCAGACAAGA
AGCGCAGGACAGGCTGCATTGGGGCCAAACACAGAATCAGCAAAGAGGAGGCCATGCGCT
GGTTCCAGCAGAAGTATGATGGGATCATCCTTCCTGGCAAATAAATTCCCGTTTCTATTC
AAAAGGCTAATAAAAAGTTTCTCATTGAAATGTACAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGTCCTGCGACCCACGACCACATCGATCTGGGGATCAAAAATGACCCAAGCATTCGCA
TCTACGGCCTGGACTTCTACGTGCTGCTGGGTAGCCCAGGTTTCAGCATCGCAGACAAGA
AGCGCAGGACAGGCTGCATTGGGGCCAAACACAGAATCAGCAAAGAGGAGGCCATGCGCT
GGTTCCAGCAGAAGTATGATGGGATCATCCTTCCTGGCAAATAAATTCCCGTTTCTATTC
AAAAGGCTAATAAAAAGTTTCTCATTGAAATGTACAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47204847|emb|CAF91250.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47204847|emb|CAF91250.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               170-288, - strand, RNAz p=0.575185

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               170-288, - strand, RNAz p=0.575185

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-290, gnl|bosTau2|chr11 (35992532-35992266)
               

               
               11-290, gnl|Hg17|chr10 (89695558-89695829)
               

               
               11-290, gnl|Mm7|chr9 (59173205-59172936)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-290, gnl|bosTau2|chr11 (35992532-35992266)
               

               
               11-290, gnl|Hg17|chr10 (89695558-89695829)
               

               
               11-290, gnl|Mm7|chr9 (59173205-59172936)

	11-290, gnl\|bosTau2\|chr11 (35992532-35992266)
	11-290, gnl\|Hg17\|chr10 (89695558-89695829)
	11-290, gnl\|Mm7\|chr9 (59173205-59172936)