Non-Coding RNA Search

mO3-MI-P-O3-abg-e-07-1-UM.s1

Sequence:


               
               GGGAAAAGTAAACCCCCCCCCCAAAAAAAAACTACCCACTGGGCCGTTTCTGCCCACATT
CGTTGGACAAGGTAATGTCCTTGTCTCCTTGGTAAAATATATGTTGCAGGGGACTTACAT
TTTCCTTATTGGTAAAATATATGTCTCGGGACTTAAACATAATTTATGTAAAGTGCCTTT
CACAGAGTCTGGCACTTAGTAGGTGCTCAATCACCATTCATTCTTCCGGCTCTTGCCCAA
AGTAACAAAAATCAGGGCTCTAGACTTACAAGCCATGCTGCTGCTAATAAAAGAAATAAT
ATGATTTATTTTTTCATTGCTGTTGGGAGAAAGGCATGTGCTTCATAAATATGTATTGGA
AAGTACTTAGCGAATGAGTAGAAATAATAAAAATACGTCAAAGTAAAAAAAAAAAAAAAA
AA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAAAAGTAAACCCCCCCCCCAAAAAAAAACTACCCACTGGGCCGTTTCTGCCCACATT
CGTTGGACAAGGTAATGTCCTTGTCTCCTTGGTAAAATATATGTTGCAGGGGACTTACAT
TTTCCTTATTGGTAAAATATATGTCTCGGGACTTAAACATAATTTATGTAAAGTGCCTTT
CACAGAGTCTGGCACTTAGTAGGTGCTCAATCACCATTCATTCTTCCGGCTCTTGCCCAA
AGTAACAAAAATCAGGGCTCTAGACTTACAAGCCATGCTGCTGCTAATAAAAGAAATAAT
ATGATTTATTTTTTCATTGCTGTTGGGAGAAAGGCATGTGCTTCATAAATATGTATTGGA
AAGTACTTAGCGAATGAGTAGAAATAATAAAAATACGTCAAAGTAAAAAAAAAAAAAAAA
AA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               39-155, + strand, RNAz p=0.936477

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               39-155, + strand, RNAz p=0.936477

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               39-407, gnl|bosTau2|chr19 (8982221-8981849)
               

               
               39-407, gnl|Hg17|chr17 (30443726-30443353)
               

               
               39-407, gnl|Mm7|chr11 (82955010-82954634)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               39-407, gnl|bosTau2|chr19 (8982221-8981849)
               

               
               39-407, gnl|Hg17|chr17 (30443726-30443353)
               

               
               39-407, gnl|Mm7|chr11 (82955010-82954634)

	39-407, gnl\|bosTau2\|chr19 (8982221-8981849)
	39-407, gnl\|Hg17\|chr17 (30443726-30443353)
	39-407, gnl\|Mm7\|chr11 (82955010-82954634)