Non-Coding RNA Search

uFN-UNL-P-FN-ab-f-09-0-UNL.s2

Sequence:


               
               CGGTCCTCAGGACGGCAGCCGCCAACTAGAAATCCAGCGCCGCGTCCCCNCCGCCCGCAC
CGTGCCGCCGCCACCGACTTCCCGGAGCGGGCCCGGCCTCCCCAAAGAGTCTCACGGTGC
GGATTCCCAGCCCGACCCCTCCCGGCGGAGGCGGCTCCGAGGCCCCGGCTGGGGCGGATC
GTGGAGCCACTGAGTCCAGGTCCTCCTCAAAGGAGGTGCCGCCGCCTCCGCCGTCGGTCA
GCATGGTTCGCACGCGGAGCCGGAGACGCTGCCGAGTCACTCGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGTCCTCAGGACGGCAGCCGCCAACTAGAAATCCAGCGCCGCGTCCCCNCCGCCCGCAC
CGTGCCGCCGCCACCGACTTCCCGGAGCGGGCCCGGCCTCCCCAAAGAGTCTCACGGTGC
GGATTCCCAGCCCGACCCCTCCCGGCGGAGGCGGCTCCGAGGCCCCGGCTGGGGCGGATC
GTGGAGCCACTGAGTCCAGGTCCTCCTCAAAGGAGGTGCCGCCGCCTCCGCCGTCGGTCA
GCATGGTTCGCACGCGGAGCCGGAGACGCTGCCGAGTCACTCGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               132-250, - strand, RNAz p=0.814421

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               132-250, - strand, RNAz p=0.814421

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AF521882, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AF521882, -

Aligned organism(s): 14 entry(ies)

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Aligned organism(s): 14 entry(ies)

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               1-290, gnl|bosTau2|chr7 (30692494-30692784)
               

               
               1-290, gnl|canFam2|chr2 (38467930-38468598)
               

               
               1-290, gnl|dasNov1|scaffold_156294 (3846-3179)
               

               
               1-290, gnl|echTel1|scaffold_277920 (48753-48086)
               

               
               1-290, gnl|hg17|chr5 (139761414-139762097)
               

               
               1-290, gnl|Hg17|chr5 (139761995-139761693)
               

               
               1-290, gnl|loxAfr1|scaffold_27556 (7954-8627)
               

               
               1-290, gnl|mm7|chr18 (36936653-36937347)
               

               
               1-290, gnl|Mm7|chr18 (36937246-36936932)
               

               
               1-290, gnl|monDom2|scaffold_6 (68351926-68351156)
               

               
               1-290, gnl|oryCun1|scaffold_213222 (32065-31396)
               

               
               1-290, gnl|panTro1|chr4 (146379753-146380430)
               

               
               1-290, gnl|rheMac2|chr6 (136825100-136825771)
               

               
               1-290, gnl|rn3|chr18 (29227628-29228290)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-290, gnl|bosTau2|chr7 (30692494-30692784)
               

               
               1-290, gnl|canFam2|chr2 (38467930-38468598)
               

               
               1-290, gnl|dasNov1|scaffold_156294 (3846-3179)
               

               
               1-290, gnl|echTel1|scaffold_277920 (48753-48086)
               

               
               1-290, gnl|hg17|chr5 (139761414-139762097)
               

               
               1-290, gnl|Hg17|chr5 (139761995-139761693)
               

               
               1-290, gnl|loxAfr1|scaffold_27556 (7954-8627)
               

               
               1-290, gnl|mm7|chr18 (36936653-36937347)
               

               
               1-290, gnl|Mm7|chr18 (36937246-36936932)
               

               
               1-290, gnl|monDom2|scaffold_6 (68351926-68351156)
               

               
               1-290, gnl|oryCun1|scaffold_213222 (32065-31396)
               

               
               1-290, gnl|panTro1|chr4 (146379753-146380430)
               

               
               1-290, gnl|rheMac2|chr6 (136825100-136825771)
               

               
               1-290, gnl|rn3|chr18 (29227628-29228290)

	1-290, gnl\|bosTau2\|chr7 (30692494-30692784)
	1-290, gnl\|canFam2\|chr2 (38467930-38468598)
	1-290, gnl\|dasNov1\|scaffold_156294 (3846-3179)
	1-290, gnl\|echTel1\|scaffold_277920 (48753-48086)
	1-290, gnl\|hg17\|chr5 (139761414-139762097)
	1-290, gnl\|Hg17\|chr5 (139761995-139761693)
	1-290, gnl\|loxAfr1\|scaffold_27556 (7954-8627)
	1-290, gnl\|mm7\|chr18 (36936653-36937347)
	1-290, gnl\|Mm7\|chr18 (36937246-36936932)
	1-290, gnl\|monDom2\|scaffold_6 (68351926-68351156)
	1-290, gnl\|oryCun1\|scaffold_213222 (32065-31396)
	1-290, gnl\|panTro1\|chr4 (146379753-146380430)
	1-290, gnl\|rheMac2\|chr6 (136825100-136825771)
	1-290, gnl\|rn3\|chr18 (29227628-29228290)