Non-Coding RNA Search

uFN-UNL-P-FN-ac-f-02-0-UNL.s1

Sequence:


               
               TTGCCTGGANTTCCCCNTTTACACCAAANTCCTATNTCATGAATATAAGANTTCACCTCA
GCAATCAAGACAATTGTGCCTTATTTTAAGACCNAAACCCACATGGACCCTGAGGTCAGA
TCAGGACACCAAGGTTTAGGGGACAAGGCTGGCTCTCTCCTTGACAGTGGCTGGGTGGGA
ATGGAAACTCTTGATTTTGGCTTCCCAATGCCTTTTGGTCATTTTTGTATAGGGAGAAGG
AAACCACTGCCTTACACAAACAGACACACACACACACACACACTTATAGACCTTCTAGAA
CATTCATCTCAGGGGCATTTTCTCCTCTAGAAAAATACCTCCAGGAGCCTCTTTGGGTGT
ACAAAAGCCCTCTGCTCCAGGGCACAACCTGCAGAGAGAGAGTTAGTTCAGAGAGGAGGC
TGCGTCTGGTGGTATTGGTTGCAGCCCAGGGGAGAGGGGTTGTGGGAACAGGGGAGATTG
GGGAAAGGCAGCAGGGCTGTGGGGNANAGAATCAGGGACAAGTGGAGACGTGCCTGCTTC
TCACTCCCCTCTCCCCGCCCCTGACCCTCTAGAACAGGTGTGATACACAGGGAGGTGTGT
TCAGGGTGCTTTGGTGGGTCACTGTCGGGAGAGGGTATCCGCCCTGGGCTGGGGAAGCCG
CCCTGAGAAGGCTGCGTCCTAAGGGAGGAACAGGCGTTGACTTCCCCTTTGGCGCCGATC
AGAAAAGTCAGCTGGGACTTCCCTGGTGGCTCACATCATAATGACTCGACGTTGTCTCTG
CAGTGGTTCTGGTTCAATCCCTGGCCTGGGAACTTCCATATGATGCAGGTGTGGCCACAT
TAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGCCTGGANTTCCCCNTTTACACCAAANTCCTATNTCATGAATATAAGANTTCACCTCA
GCAATCAAGACAATTGTGCCTTATTTTAAGACCNAAACCCACATGGACCCTGAGGTCAGA
TCAGGACACCAAGGTTTAGGGGACAAGGCTGGCTCTCTCCTTGACAGTGGCTGGGTGGGA
ATGGAAACTCTTGATTTTGGCTTCCCAATGCCTTTTGGTCATTTTTGTATAGGGAGAAGG
AAACCACTGCCTTACACAAACAGACACACACACACACACACACTTATAGACCTTCTAGAA
CATTCATCTCAGGGGCATTTTCTCCTCTAGAAAAATACCTCCAGGAGCCTCTTTGGGTGT
ACAAAAGCCCTCTGCTCCAGGGCACAACCTGCAGAGAGAGAGTTAGTTCAGAGAGGAGGC
TGCGTCTGGTGGTATTGGTTGCAGCCCAGGGGAGAGGGGTTGTGGGAACAGGGGAGATTG
GGGAAAGGCAGCAGGGCTGTGGGGNANAGAATCAGGGACAAGTGGAGACGTGCCTGCTTC
TCACTCCCCTCTCCCCGCCCCTGACCCTCTAGAACAGGTGTGATACACAGGGAGGTGTGT
TCAGGGTGCTTTGGTGGGTCACTGTCGGGAGAGGGTATCCGCCCTGGGCTGGGGAAGCCG
CCCTGAGAAGGCTGCGTCCTAAGGGAGGAACAGGCGTTGACTTCCCCTTTGGCGCCGATC
AGAAAAGTCAGCTGGGACTTCCCTGGTGGCTCACATCATAATGACTCGACGTTGTCTCTG
CAGTGGTTCTGGTTCAATCCCTGGCCTGGGAACTTCCATATGATGCAGGTGTGGCCACAT
TAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               267-371, - strand, RNAz p=0.848983
               

               
               437-548, - strand, RNAz p=0.997928

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               267-371, - strand, RNAz p=0.848983
               

               
               437-548, - strand, RNAz p=0.997928

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               26-735, gnl|bosTau2|chr17 (34935315-34934579)
               

               
               26-735, gnl|Hg17|chr12 (107516548-107514778)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-735, gnl|bosTau2|chr17 (34935315-34934579)
               

               
               26-735, gnl|Hg17|chr12 (107516548-107514778)

	267-371, - strand, RNAz p=0.848983
	437-548, - strand, RNAz p=0.997928

	26-735, gnl\|bosTau2\|chr17 (34935315-34934579)
	26-735, gnl\|Hg17\|chr12 (107516548-107514778)