Non-Coding RNA Search

uFN-UNL-P-FN-ag-b-12-0-UNL.s1

Sequence:


               
               AATTGTGCCTNATTTAAGACNAAAACCCACATGGNCCCTGAGGGTCAGATCAGGACACCA
AGGTTTAGGGGACAAGGCTGGCTCTCTCCTTGACAGTGGCTGGGTGGGAATGGAAACTCT
TGATTTTGGCTTCCCAATGCCTTTTGGTCATNTTTGTATAGGGAGAAGGAAACCACTGCC
TTACACAAACAGACACACACACACACACACACTTATAGACCTTCTAGAACATTCATCTCA
GGGGCATTTTCTCCTCTAGAAAAATACCTCCAGGAGCCTCTTTGGGTGTACAAAAGCCCT
CTGCTCCAGGGCACAACCTGCAGAGAGAGAGTTAGTTCAGAGAGGAGGCTGCGTCTGGTG
GTATTGGTTGCAGCCCAGGGGAGAGGGGTTGTGGGAACAGGGGAGATTGGGGAAAGGCAG
CAGGGCTGTGGGGGANAGAATCAGGGACAAGTGGAGACGTGCCTGCTTCTNACTCCCCTC
TCCCCGCCCCTGACCCTCTAGAACAGGTGTGATACACAGGGAGGTGTGTTCAGGGTGCTT
TGGTGGGTCACTGTCGGGAGAGGGTATCCGCCCTGGGCTGGGGAAGCCGCCCTGAGAAGG
CTGCGTCCTAAGGGAGGAACAGGCGTTGACTTCCCCTTTGGCGCCGATCAGAAAAGTCAG
CTGGGACTTCCCTGGTGGCTCACATCATAATGACTCGACGTTGTCTCTGCAGTGGTTCTG
GTTCAATCCCTGGCCTGGGAACTTCCATATGATGCAGGTGTGGCCACATTAAAAAAAAAA
AAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTGTGCCTNATTTAAGACNAAAACCCACATGGNCCCTGAGGGTCAGATCAGGACACCA
AGGTTTAGGGGACAAGGCTGGCTCTCTCCTTGACAGTGGCTGGGTGGGAATGGAAACTCT
TGATTTTGGCTTCCCAATGCCTTTTGGTCATNTTTGTATAGGGAGAAGGAAACCACTGCC
TTACACAAACAGACACACACACACACACACACTTATAGACCTTCTAGAACATTCATCTCA
GGGGCATTTTCTCCTCTAGAAAAATACCTCCAGGAGCCTCTTTGGGTGTACAAAAGCCCT
CTGCTCCAGGGCACAACCTGCAGAGAGAGAGTTAGTTCAGAGAGGAGGCTGCGTCTGGTG
GTATTGGTTGCAGCCCAGGGGAGAGGGGTTGTGGGAACAGGGGAGATTGGGGAAAGGCAG
CAGGGCTGTGGGGGANAGAATCAGGGACAAGTGGAGACGTGCCTGCTTCTNACTCCCCTC
TCCCCGCCCCTGACCCTCTAGAACAGGTGTGATACACAGGGAGGTGTGTTCAGGGTGCTT
TGGTGGGTCACTGTCGGGAGAGGGTATCCGCCCTGGGCTGGGGAAGCCGCCCTGAGAAGG
CTGCGTCCTAAGGGAGGAACAGGCGTTGACTTCCCCTTTGGCGCCGATCAGAAAAGTCAG
CTGGGACTTCCCTGGTGGCTCACATCATAATGACTCGACGTTGTCTCTGCAGTGGTTCTG
GTTCAATCCCTGGCCTGGGAACTTCCATATGATGCAGGTGTGGCCACATTAAAAAAAAAA
AAAAAAAA

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

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               203-304, - strand, RNAz p=0.698404
               

               
               373-484, - strand, RNAz p=0.999962

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               203-304, - strand, RNAz p=0.698404
               

               
               373-484, - strand, RNAz p=0.999962

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               7-664, gnl|bosTau2|chr17 (34935256-34934579)
               

               
               7-664, gnl|Hg17|chr12 (107516504-107514778)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-664, gnl|bosTau2|chr17 (34935256-34934579)
               

               
               7-664, gnl|Hg17|chr12 (107516504-107514778)

	203-304, - strand, RNAz p=0.698404
	373-484, - strand, RNAz p=0.999962

	7-664, gnl\|bosTau2\|chr17 (34935256-34934579)
	7-664, gnl\|Hg17\|chr12 (107516504-107514778)