Non-Coding RNA Search

uFN-UNL-P-FN-ak-a-02-0-UNL.s1

Sequence:


               
               AGTGGGANNCCATGAGAGGGANNAGGAGCAGGATGAAGGCCCACCACTTCTATGTGACTC
TGGCCAAAGGCCCTTTCCCACTCGTGATCCTTAAGTGTGTTCTGGAATGTGGAAGTGGGA
GGCTGGGCCACTGCTAGGAATTTTTGTAGTTAGAGTCTGGGGCAGGAAGTGAGCTGTGCC
CCAGGAGGATAGGCTGTCCCCGGCTCTTGGAGGGCGGGCCCAGCGCCCCCTCTTCCTCGT
GGAAGGGGGCGCAGGGCGGGGATCCGTCCCTGGCCCTGAGCCNACTGACCCNTCTTCCGT
CCCCCCGCCCCCCTGCAGGCTGCCCTGGCCAGTACTGGGGTCCCGACTGCCGGGAGACCT
GCACCTGCCACCCGCACGGCCAGTGCGAGCCAGCCACGGGCGTGTGCCGCTGCCAACCCG
ACCGCTGGGGCAGCCGCTGCGAGTTCCCGTGCCCTGCGGCCCGCACGGGCGTTGCGACCC
CGAGACAGGCGCGTGTCACTGCGAACCCGGCTGGTGGTCGTCCACGTGCCGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGGGANNCCATGAGAGGGANNAGGAGCAGGATGAAGGCCCACCACTTCTATGTGACTC
TGGCCAAAGGCCCTTTCCCACTCGTGATCCTTAAGTGTGTTCTGGAATGTGGAAGTGGGA
GGCTGGGCCACTGCTAGGAATTTTTGTAGTTAGAGTCTGGGGCAGGAAGTGAGCTGTGCC
CCAGGAGGATAGGCTGTCCCCGGCTCTTGGAGGGCGGGCCCAGCGCCCCCTCTTCCTCGT
GGAAGGGGGCGCAGGGCGGGGATCCGTCCCTGGCCCTGAGCCNACTGACCCNTCTTCCGT
CCCCCCGCCCCCCTGCAGGCTGCCCTGGCCAGTACTGGGGTCCCGACTGCCGGGAGACCT
GCACCTGCCACCCGCACGGCCAGTGCGAGCCAGCCACGGGCGTGTGCCGCTGCCAACCCG
ACCGCTGGGGCAGCCGCTGCGAGTTCCCGTGCCCTGCGGCCCGCACGGGCGTTGCGACCC
CGAGACAGGCGCGTGTCACTGCGAACCCGGCTGGTGGTCGTCCACGTGCCGCCGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               185-326, - strand, RNAz p=0.987785

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               185-326, - strand, RNAz p=0.987785

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-535, gnl|bosTau2|chr19 (17284968-17284453)
               

               
               4-535, gnl|Hg17|chr17 (1494349-1493794)
               

               
               4-535, gnl|Mm7|chr11 (75596429-75596957)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-535, gnl|bosTau2|chr19 (17284968-17284453)
               

               
               4-535, gnl|Hg17|chr17 (1494349-1493794)
               

               
               4-535, gnl|Mm7|chr11 (75596429-75596957)

	4-535, gnl\|bosTau2\|chr19 (17284968-17284453)
	4-535, gnl\|Hg17\|chr17 (1494349-1493794)
	4-535, gnl\|Mm7\|chr11 (75596429-75596957)