Non-Coding RNA Search

uFN-UNL-P-FN-av-a-11-0-UNL.s1

Sequence:


               
               AGAGGGTTGAATACAGACCGAATCTATTTGCGACTCCGGCACATGGAGGAGAAATGAAGG
ACGCAAAGAGAGAGCTCGTGGTGGAAACAATCCAGATGAACACTGTCTTTGATGCGAAGC
CAAAGACCCAGTTACCGGGGCAATATATGAATTCAACTCAAAATCTGGAGCCCGAAGGTG
GAAAGATCCCTTAACCCAAATGCCAAAGTGGAAAGAGTCCAGGCCCCAGGAAACTGTCAC
TGGGGAAGGGACCAAGCCACCCGGGGGCTCTGACAAGGAAAGAGATGGGCTGAGCAGCAA
AGCCCAAGCTGAAGATGCAGGCCCGGGGTCGAGGAACCAGGACGGCAGGCCGAGCACCCC
AAAGGAAAGAAATCCAGCCCTCAAAAGCCAGGTATCCCCAAAACTGCACCCAGAAAAGTG
AACGGTGTCTGCTTGCCAGGCTCACAGCACAGCACAGCCCACGGAGGGACCCCGACTGTC
CTGGATGCTGCCTCACCCTTCATGCTTCGAGGGCAGGGTGGGGGTCAGAGAGCTGAAAAC
GAAGGGGAGCCGGGGTCCCAGATGGGATATCTGACAAACTTTAAAATAAACAGAAAGAGG
TTTGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGGGTTGAATACAGACCGAATCTATTTGCGACTCCGGCACATGGAGGAGAAATGAAGG
ACGCAAAGAGAGAGCTCGTGGTGGAAACAATCCAGATGAACACTGTCTTTGATGCGAAGC
CAAAGACCCAGTTACCGGGGCAATATATGAATTCAACTCAAAATCTGGAGCCCGAAGGTG
GAAAGATCCCTTAACCCAAATGCCAAAGTGGAAAGAGTCCAGGCCCCAGGAAACTGTCAC
TGGGGAAGGGACCAAGCCACCCGGGGGCTCTGACAAGGAAAGAGATGGGCTGAGCAGCAA
AGCCCAAGCTGAAGATGCAGGCCCGGGGTCGAGGAACCAGGACGGCAGGCCGAGCACCCC
AAAGGAAAGAAATCCAGCCCTCAAAAGCCAGGTATCCCCAAAACTGCACCCAGAAAAGTG
AACGGTGTCTGCTTGCCAGGCTCACAGCACAGCACAGCCCACGGAGGGACCCCGACTGTC
CTGGATGCTGCCTCACCCTTCATGCTTCGAGGGCAGGGTGGGGGTCAGAGAGCTGAAAAC
GAAGGGGAGCCGGGGTCCCAGATGGGATATCTGACAAACTTTAAAATAAACAGAAAGAGG
TTTGAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61815674|ref|XP_600460.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61815674|ref|XP_600460.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               166-270, + strand, RNAz p=0.999813

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               166-270, + strand, RNAz p=0.999813

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of AK074414, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of AK074414, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               127-423, gnl|bosTau2|chr4 (23719574-23719263)
               

               
               127-423, gnl|Hg17|chr7 (105266785-105267096)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               127-423, gnl|bosTau2|chr4 (23719574-23719263)
               

               
               127-423, gnl|Hg17|chr7 (105266785-105267096)

	127-423, gnl\|bosTau2\|chr4 (23719574-23719263)
	127-423, gnl\|Hg17\|chr7 (105266785-105267096)