Non-Coding RNA Search

uFN-UNL-P-FN-bz-a-09-0-UNL.s1

Sequence:


               
               CCTGTNCCTCCTGCTTTCACTGGCTGAAGTNTCACATGACTAAAGGCAATACTATCTTTT
GAGGCACTAGAACCCACTATTTCCCAGGAGGAGCTAGAGTGCAAATTGTACTGCTATCAG
ACAAGCTGCTAGTCCACGTTTTATTTCTGAAACACTGCTCTTCCAAAAGTGCTTGGGCCT
TTTAATGATTGCACTTGAACATGCTTAACTGCTGGCATGTGTATTCAAATCAAGGCTATA
GAAACCAATGTGCCCAGGCCAAGGAATTCAGAAGCTAAAATCCAAGCCTCAGAGCAGCGT
TCACTGATNTGCGCTCGGCTGAAGGAGGCAGCACCCACGCCTCGGACCAGCGTGGCTACA
CCCACCACGCTGGGGATGTGGCTCCGGGCAGAGGAGTGCCAGCCGCTCTTCTGTCCTCAG
CAAAGATAGAACACTGCTGAACATGCACTGTCGCCGAATTTCAAGTGTTCATAACTCGTT
TGTGTCAGATAAGGCGTTTGGAGACTCTAAGAGGCCTGACTATAAACAATATCAATAAAC
AAATCATGAGTGACCAGTGTTTATCACCCTGAACAAATATTTTAAAGATGAGAAAGTTGT
TAAACAATCCAGGCTCAGGCATCTCTTATTTATCTCCAGTTTTGGTGAATCCGAGTTAGA
AACCCCTGAAAAACACGGGACGAGATGAATCAGCTGTGAGAGCAAGCACCACAGAGATGG
AGAAGAGCACTGGACTCATGTCAGGAGGAAGAGTCGGGCAAGTTCTCGGCAGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGTNCCTCCTGCTTTCACTGGCTGAAGTNTCACATGACTAAAGGCAATACTATCTTTT
GAGGCACTAGAACCCACTATTTCCCAGGAGGAGCTAGAGTGCAAATTGTACTGCTATCAG
ACAAGCTGCTAGTCCACGTTTTATTTCTGAAACACTGCTCTTCCAAAAGTGCTTGGGCCT
TTTAATGATTGCACTTGAACATGCTTAACTGCTGGCATGTGTATTCAAATCAAGGCTATA
GAAACCAATGTGCCCAGGCCAAGGAATTCAGAAGCTAAAATCCAAGCCTCAGAGCAGCGT
TCACTGATNTGCGCTCGGCTGAAGGAGGCAGCACCCACGCCTCGGACCAGCGTGGCTACA
CCCACCACGCTGGGGATGTGGCTCCGGGCAGAGGAGTGCCAGCCGCTCTTCTGTCCTCAG
CAAAGATAGAACACTGCTGAACATGCACTGTCGCCGAATTTCAAGTGTTCATAACTCGTT
TGTGTCAGATAAGGCGTTTGGAGACTCTAAGAGGCCTGACTATAAACAATATCAATAAAC
AAATCATGAGTGACCAGTGTTTATCACCCTGAACAAATATTTTAAAGATGAGAAAGTTGT
TAAACAATCCAGGCTCAGGCATCTCTTATTTATCTCCAGTTTTGGTGAATCCGAGTTAGA
AACCCCTGAAAAACACGGGACGAGATGAATCAGCTGTGAGAGCAAGCACCACAGAGATGG
AGAAGAGCACTGGACTCATGTCAGGAGGAAGAGTCGGGCAAGTTCTCGGCAGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               149-268, + strand, RNAz p=0.728126

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               149-268, + strand, RNAz p=0.728126

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-771, gnl|bosTau2|chr3 (73139147-73139924)
               

               
               3-771, gnl|Hg17|chr1 (39616616-39615849)
               

               
               3-771, gnl|Mm7|chr4 (122798192-122799072)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-771, gnl|bosTau2|chr3 (73139147-73139924)
               

               
               3-771, gnl|Hg17|chr1 (39616616-39615849)
               

               
               3-771, gnl|Mm7|chr4 (122798192-122799072)

	3-771, gnl\|bosTau2\|chr3 (73139147-73139924)
	3-771, gnl\|Hg17\|chr1 (39616616-39615849)
	3-771, gnl\|Mm7\|chr4 (122798192-122799072)