Non-Coding RNA Search

uFN-UNL-P-FN-cb-c-05-0-UNL.s1

Sequence:


               
               AAGGTACAATGCCCCCACTAGACTCTACTCCACGTTCTCTNTCTTTGCACTGNAAATATC
TGCACCGTCTCATAGACAGACTCCAGATCCTCCGGGTACCGGATCTCCAGNTCTGCGTTT
GGGATGTAGTGTGTGCCGGTGAACTCTGAGAAATAGCGTCCGACATCAGGGTGTGAGATC
TCCTGTGGCTCCACGTTATACTCCAAGTTCTCTTGGGCTGCGTATCTACAAGACCCGTCC
TCCACCAGAACATTATAGAAAGGCTGATGATGGCCATGCGGTAGGCTATGGACGTTCATG
TTTCGAATCCATTCGTGTCCCATCATGCAGGTGGGGTCCCAGCCATAGATGACACAGTNA
TAGCCATACCTCTTATGCTTCATAATGAGCCCAATGGAGTAGCAGACATCTCTGTGCTTC
TCGTGGGAGCGGAGCTTCACCTCCACGCCCACCTCCTCCTTCTTACGCTCAATGTGCTCG
AGCGTGTGCTGTACCAGGTAGCCCACTGCCCCGTGCTGCCCGGGGTCTAGGGTTTGGATG
TGCTGGAGGATNTCAAGCACCTTCAAGACAAGACAGAAAGACTTCTCTGGCCAGATGCCC
AGGTGGAAGTAGAGCCTGGCCTGGAGGAGGAGAAGCTGCACCTGGTCCGGGTACATCGCC
AGATACAGATCCAGGGAGTCTCTCAGGAGCTGGTATGACTGGTCGATGCCTTCCCTGGGG
GAGGGGAAATCAATCCTGTTGTATTCTGTATCTTCTGAGAGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGTACAATGCCCCCACTAGACTCTACTCCACGTTCTCTNTCTTTGCACTGNAAATATC
TGCACCGTCTCATAGACAGACTCCAGATCCTCCGGGTACCGGATCTCCAGNTCTGCGTTT
GGGATGTAGTGTGTGCCGGTGAACTCTGAGAAATAGCGTCCGACATCAGGGTGTGAGATC
TCCTGTGGCTCCACGTTATACTCCAAGTTCTCTTGGGCTGCGTATCTACAAGACCCGTCC
TCCACCAGAACATTATAGAAAGGCTGATGATGGCCATGCGGTAGGCTATGGACGTTCATG
TTTCGAATCCATTCGTGTCCCATCATGCAGGTGGGGTCCCAGCCATAGATGACACAGTNA
TAGCCATACCTCTTATGCTTCATAATGAGCCCAATGGAGTAGCAGACATCTCTGTGCTTC
TCGTGGGAGCGGAGCTTCACCTCCACGCCCACCTCCTCCTTCTTACGCTCAATGTGCTCG
AGCGTGTGCTGTACCAGGTAGCCCACTGCCCCGTGCTGCCCGGGGTCTAGGGTTTGGATG
TGCTGGAGGATNTCAAGCACCTTCAAGACAAGACAGAAAGACTTCTCTGGCCAGATGCCC
AGGTGGAAGTAGAGCCTGGCCTGGAGGAGGAGAAGCTGCACCTGGTCCGGGTACATCGCC
AGATACAGATCCAGGGAGTCTCTCAGGAGCTGGTATGACTGGTCGATGCCTTCCCTGGGG
GAGGGGAAATCAATCCTGTTGTATTCTGTATCTTCTGAGAGCGGCCGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61862644|ref|XP_610578.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61862644|ref|XP_610578.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-213, gnl|bosTau2|chr17 (33236313-33236102)
               

               
               1-213, gnl|Hg17|chr12 (116046588-116046804)
               

               
               1-213, gnl|Mm7|chr5 (117237221-117236999)
               


               
               368-583, gnl|bosTau2|chr17 (33227853-33227638)
               

               
               368-583, gnl|Hg17|chr12 (116058396-116058611)
               

               
               368-583, gnl|Mm7|chr5 (117229521-117229306)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-213, gnl|bosTau2|chr17 (33236313-33236102)
               

               
               1-213, gnl|Hg17|chr12 (116046588-116046804)
               

               
               1-213, gnl|Mm7|chr5 (117237221-117236999)
               


               
               368-583, gnl|bosTau2|chr17 (33227853-33227638)
               

               
               368-583, gnl|Hg17|chr12 (116058396-116058611)
               

               
               368-583, gnl|Mm7|chr5 (117229521-117229306)

	1-213, gnl\|bosTau2\|chr17 (33236313-33236102)
	1-213, gnl\|Hg17\|chr12 (116046588-116046804)
	1-213, gnl\|Mm7\|chr5 (117237221-117236999)

	368-583, gnl\|bosTau2\|chr17 (33227853-33227638)
	368-583, gnl\|Hg17\|chr12 (116058396-116058611)
	368-583, gnl\|Mm7\|chr5 (117229521-117229306)