Non-Coding RNA Search

uFN-UNL-P-FN-cd-f-08-0-UNL.s1

Sequence:


               
               CAGNTTAACNANTTTTTCCCCTGCCCCAGGAGGGGANAGGCGTGAAGGGCAGGGCCTGGA
GCAAGAAAGGAGNGCTTTCTTGGCTACATTTNCCCAATTATGGATGAAACTTACCTGGGT
GCATGATCTGGTNACNTCAGTCAGTATGGAGCAGGGTGTGCACACTGAGTGGTTGCCTCT
GATAGCTGGGTTGGGAGCAGGACATGCAAAGAATGGACATGGTCCTAGGCACAGTAGGGG
AACGTCACCAGTGGGCCACTGTGAGGTGTGGCTTAAAAGGCACCTGTCAATAAAAAGCGA
AGTAGCCTTTAGCCTTGGCCCCTCAGTGGGCAGGACTATTTAGTTGAGGGCCTTGGAAAT
TGTCTTAGAAGATAGATACAGCTAGGAGAAGTGTCTAGTTAAAGGTAGGATATGCAGATG
AAGGGGCAAGGTCTGTGTCAAGGTTTCAGGAAAGTGCAGGAATATATAGAAGAGAGAAAC
CAGAAGAGCATCCATTGCCCCTGTCAGTAGGACAAGGGATTTGGGAGTTCCCTTTGTGGC
GCAgttgctgtggctgtggcgtaggctgatggctacagctcggatttgatccctggcctg
ggagcctccatatgccacaggtgcagccctGGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGNTTAACNANTTTTTCCCCTGCCCCAGGAGGGGANAGGCGTGAAGGGCAGGGCCTGGA
GCAAGAAAGGAGNGCTTTCTTGGCTACATTTNCCCAATTATGGATGAAACTTACCTGGGT
GCATGATCTGGTNACNTCAGTCAGTATGGAGCAGGGTGTGCACACTGAGTGGTTGCCTCT
GATAGCTGGGTTGGGAGCAGGACATGCAAAGAATGGACATGGTCCTAGGCACAGTAGGGG
AACGTCACCAGTGGGCCACTGTGAGGTGTGGCTTAAAAGGCACCTGTCAATAAAAAGCGA
AGTAGCCTTTAGCCTTGGCCCCTCAGTGGGCAGGACTATTTAGTTGAGGGCCTTGGAAAT
TGTCTTAGAAGATAGATACAGCTAGGAGAAGTGTCTAGTTAAAGGTAGGATATGCAGATG
AAGGGGCAAGGTCTGTGTCAAGGTTTCAGGAAAGTGCAGGAATATATAGAAGAGAGAAAC
CAGAAGAGCATCCATTGCCCCTGTCAGTAGGACAAGGGATTTGGGAGTTCCCTTTGTGGC
GCAgttgctgtggctgtggcgtaggctgatggctacagctcggatttgatccctggcctg
ggagcctccatatgccacaggtgcagccctGGAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               253-372, + strand, RNAz p=0.888025

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               253-372, + strand, RNAz p=0.888025

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               61-504, gnl|bosTau2|chr18 (45596899-45597336)
               

               
               61-504, gnl|Hg17|chr19 (44492300-44491530)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               61-504, gnl|bosTau2|chr18 (45596899-45597336)
               

               
               61-504, gnl|Hg17|chr19 (44492300-44491530)

	61-504, gnl\|bosTau2\|chr18 (45596899-45597336)
	61-504, gnl\|Hg17\|chr19 (44492300-44491530)