Non-Coding RNA Search

uFN-UNL-P-FN-ce-g-05-0-UNL.s1

Sequence:


               
               ACAAGCTGTGACAAAATTCTGTCATCTTCAGGGTGCAATTTTGTTTATATACACTGTATG
TATATATTTCTCTTAGATTTGGCTGTAGTGGACTGGCCATGGTTCAAGTGGGACTATAGC
AGTACTTGGGTCGGGGACAGTCATTTTGGCTATGTACACATTCATAGTCGGTCCATGGCT
NCCAACTAGTAGCGCTATTTCCGAAGGTCTAATACACAAACTGAACCATCTGATGCACTG
GCTCCAACCTTGTCTCCTGCTGCATTCCAACAAACTTCAAAAATTCCACCTGTTCCCCTA
TAGCTGTGAACAAGAGCACCTGTCTGTGTGTTCCAGATGTGCACACATTTGTCAAAAGAA
CCACTTGCCAGATACCGGCCATCAGGACTGAAAGCTACACTGTACACAGGCTCTTGGTGT
TTTGTCAAAGTGTGGATGCAAATTCCTCGGTCTACATCCCATAATCTAACAGTAGAATCA
AAGAGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAAGCTGTGACAAAATTCTGTCATCTTCAGGGTGCAATTTTGTTTATATACACTGTATG
TATATATTTCTCTTAGATTTGGCTGTAGTGGACTGGCCATGGTTCAAGTGGGACTATAGC
AGTACTTGGGTCGGGGACAGTCATTTTGGCTATGTACACATTCATAGTCGGTCCATGGCT
NCCAACTAGTAGCGCTATTTCCGAAGGTCTAATACACAAACTGAACCATCTGATGCACTG
GCTCCAACCTTGTCTCCTGCTGCATTCCAACAAACTTCAAAAATTCCACCTGTTCCCCTA
TAGCTGTGAACAAGAGCACCTGTCTGTGTGTTCCAGATGTGCACACATTTGTCAAAAGAA
CCACTTGCCAGATACCGGCCATCAGGACTGAAAGCTACACTGTACACAGGCTCTTGGTGT
TTTGTCAAAGTGTGGATGCAAATTCCTCGGTCTACATCCCATAATCTAACAGTAGAATCA
AAGAGCGGCCGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|50807285|ref|XP_424555.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|50807285|ref|XP_424555.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               80-199, + strand, RNAz p=0.658424

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-199, + strand, RNAz p=0.658424

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-221, gnl|bosTau2|chr1 (60324295-60324515)
               

               
               1-221, gnl|Hg17|chr3 (178225794-178226014)
               

               
               1-221, gnl|Mm7|chr3 (21949875-21949658)
               


               
               324-483, gnl|bosTau2|chr1 (60328059-60328218)
               

               
               324-483, gnl|Hg17|chr3 (178233461-178233620)
               

               
               324-483, gnl|Mm7|chr3 (21943249-21943090)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-221, gnl|bosTau2|chr1 (60324295-60324515)
               

               
               1-221, gnl|Hg17|chr3 (178225794-178226014)
               

               
               1-221, gnl|Mm7|chr3 (21949875-21949658)
               


               
               324-483, gnl|bosTau2|chr1 (60328059-60328218)
               

               
               324-483, gnl|Hg17|chr3 (178233461-178233620)
               

               
               324-483, gnl|Mm7|chr3 (21943249-21943090)

	1-221, gnl\|bosTau2\|chr1 (60324295-60324515)
	1-221, gnl\|Hg17\|chr3 (178225794-178226014)
	1-221, gnl\|Mm7\|chr3 (21949875-21949658)

	324-483, gnl\|bosTau2\|chr1 (60328059-60328218)
	324-483, gnl\|Hg17\|chr3 (178233461-178233620)
	324-483, gnl\|Mm7\|chr3 (21943249-21943090)