uFN-UNL-P-FN-ch-a-08-0-UNL.s1
|
GAGGTCCAGTACTACCCTGTGGTCCTGGAGATCCAGGGGGGCCTGCTAAGCCAGGAGGAC
CAGAAGTACCTGGAGAACCCGTTGGGCCTTTGGCACCAGGTGTACCATCAGTTCCCACTG
CACCAGGAAGACCTTGAGAGCCAACGGGACCTGGTGGCCCAGTTTCACCTCTTTGCCCCT
GAGGACCTTCAGGGCCTCGTGCCCCAGTGGGACCTGCTTCTCCCTTCATTCCAGGATTTC
CTGGAAAACCAGGGGAGCCAGGTATCCCAAGAGGACCCATTGGCCCAGGTTTTCCAGGCA
TACCATGTGCACCTCGTTGTCCAGGAGCACCCTGTGGCCCAAGTCTCCCAGCGGCCGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GAGGTCCAGTACTACCCTGTGGTCCTGGAGATCCAGGGGGGCCTGCTAAGCCAGGAGGAC
CAGAAGTACCTGGAGAACCCGTTGGGCCTTTGGCACCAGGTGTACCATCAGTTCCCACTG
CACCAGGAAGACCTTGAGAGCCAACGGGACCTGGTGGCCCAGTTTCACCTCTTTGCCCCT
GAGGACCTTCAGGGCCTCGTGCCCCAGTGGGACCTGCTTCTCCCTTCATTCCAGGATTTC
CTGGAAAACCAGGGGAGCCAGGTATCCCAAGAGGACCCATTGGCCCAGGTTTTCCAGGCA
TACCATGTGCACCTCGTTGTCCAGGAGCACCCTGTGGCCCAAGTCTCCCAGCGGCCGC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
124-225, gnl|bosTau2|chr2 (3060155-3060054) |
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124-225, gnl|canFam2|chr36 (33606679-33606793) |
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124-225, gnl|danRer3|chr3 (15950629-15950517) |
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124-225, gnl|dasNov1|scaffold_1007 (25089-24976) |
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124-225, gnl|echTel1|scaffold_288923 (88757-88644) |
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124-225, gnl|fr1|chrUn (211933171-211933300) |
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124-225, gnl|galGal2|chr7 (504970-504856) |
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124-225, gnl|hg17|chr2 (189759012-189759126) |
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124-225, gnl|Hg17|chr2 (189759017-189759118) |
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124-225, gnl|loxAfr1|scaffold_4638 (44356-44242) |
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124-225, gnl|mm7|chr1 (45644347-45644461) |
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124-225, gnl|Mm7|chr1 (45644352-45644453) |
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124-225, gnl|monDom2|scaffold_2 (94371140-94371254) |
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124-225, gnl|oryCun1|scaffold_199521 (173607-173493) |
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124-225, gnl|panTro1|chr13 (79626874-79626988) |
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124-225, gnl|rheMac2|chr12 (52708185-52708299) |
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124-225, gnl|rn3|chr9 (44408489-44408603) |
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124-225, gnl|tetNig1|chr9 (7668065-7667967) |
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124-225, gnl|xenTro1|scaffold_48 (682682-682796) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
124-225, gnl|bosTau2|chr2 (3060155-3060054) |
|
124-225, gnl|canFam2|chr36 (33606679-33606793) |
|
124-225, gnl|danRer3|chr3 (15950629-15950517) |
|
124-225, gnl|dasNov1|scaffold_1007 (25089-24976) |
|
124-225, gnl|echTel1|scaffold_288923 (88757-88644) |
|
124-225, gnl|fr1|chrUn (211933171-211933300) |
|
124-225, gnl|galGal2|chr7 (504970-504856) |
|
124-225, gnl|hg17|chr2 (189759012-189759126) |
|
124-225, gnl|Hg17|chr2 (189759017-189759118) |
|
124-225, gnl|loxAfr1|scaffold_4638 (44356-44242) |
|
124-225, gnl|mm7|chr1 (45644347-45644461) |
|
124-225, gnl|Mm7|chr1 (45644352-45644453) |
|
124-225, gnl|monDom2|scaffold_2 (94371140-94371254) |
|
124-225, gnl|oryCun1|scaffold_199521 (173607-173493) |
|
124-225, gnl|panTro1|chr13 (79626874-79626988) |
|
124-225, gnl|rheMac2|chr12 (52708185-52708299) |
|
124-225, gnl|rn3|chr9 (44408489-44408603) |
|
124-225, gnl|tetNig1|chr9 (7668065-7667967) |
|
124-225, gnl|xenTro1|scaffold_48 (682682-682796) |
