Non-Coding RNA Search

uFN-UNL-P-FN-ct-a-04-0-UNL.s1

Sequence:


               
               NNCTATAGGACATTTGGCCCTCGAGNCCNAAGNAATTCNTTTCCGCCTTAAAAGTTGGCA
AGGTCGGTTCTGCNACAGCTGGNTCAGGGGCTTGGCCCAAGGCCTCATGTCTCCTCGGCN
TCNTCATCGGGGGTCAGCTGTTCCGACATCTCGNCGTCACTGACGCAATCCTGCAACACG
AGTGGGTGATGGCGGGGGAGCTTGCTTAAGGGCTGACGGCGGCCCCTGGACTTCTTACTC
TCCTCCAAGGAGAACATGTCGTCATCCGCAACCTCGGCCAGCTCCCGCTCGCTGATGCCC
CTGCTGGCGCTGCCTTTCTTCCTCGTGCACGGCTCTCCCACGGTGACCCTGCCGTCCCCT
CTGGCGTAGCTGTGCACGGTGAGAACTCCTGTTTGCCCCTGGCCTTGGCAGGACAGAGGC
TCACTGGCTTCTGAATCGGAAGAAACAGAATCCCGTGAGGAACCGGAACCCAGGCTGGAA
GACGACTTCTTGGAGCCTGAGAAGACGAGGCGTCCCCCGAGAGAAGCTGGATTCACAGAA
AGATCCAGGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               NNCTATAGGACATTTGGCCCTCGAGNCCNAAGNAATTCNTTTCCGCCTTAAAAGTTGGCA
AGGTCGGTTCTGCNACAGCTGGNTCAGGGGCTTGGCCCAAGGCCTCATGTCTCCTCGGCN
TCNTCATCGGGGGTCAGCTGTTCCGACATCTCGNCGTCACTGACGCAATCCTGCAACACG
AGTGGGTGATGGCGGGGGAGCTTGCTTAAGGGCTGACGGCGGCCCCTGGACTTCTTACTC
TCCTCCAAGGAGAACATGTCGTCATCCGCAACCTCGGCCAGCTCCCGCTCGCTGATGCCC
CTGCTGGCGCTGCCTTTCTTCCTCGTGCACGGCTCTCCCACGGTGACCCTGCCGTCCCCT
CTGGCGTAGCTGTGCACGGTGAGAACTCCTGTTTGCCCCTGGCCTTGGCAGGACAGAGGC
TCACTGGCTTCTGAATCGGAAGAAACAGAATCCCGTGAGGAACCGGAACCCAGGCTGGAA
GACGACTTCTTGGAGCCTGAGAAGACGAGGCGTCCCCCGAGAGAAGCTGGATTCACAGAA
AGATCCAGGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               271-547, - strand, RNAz p=0.878989

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               271-547, - strand, RNAz p=0.878989

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               271-547, gnl|bosTau2|chr3 (71300540-71300816)
               

               
               271-547, gnl|Hg17|chr1 (43806641-43806362)
               

               
               271-547, gnl|Mm7|chr4 (117536571-117536850)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               271-547, gnl|bosTau2|chr3 (71300540-71300816)
               

               
               271-547, gnl|Hg17|chr1 (43806641-43806362)
               

               
               271-547, gnl|Mm7|chr4 (117536571-117536850)

	271-547, gnl\|bosTau2\|chr3 (71300540-71300816)
	271-547, gnl\|Hg17\|chr1 (43806641-43806362)
	271-547, gnl\|Mm7\|chr4 (117536571-117536850)