uFN-UNL-P-FN-cx-a-08-0-UNL.s1
|
GGCNGAGGGTAGTTCCGCACAAACTTCTTTTCCACATATTTGTCCTTGATCCAGGCCTCC
TTGTCCTGCCTGGGGCTGTTGGCCGTGGGCTTCCTGCTGCCCAGCCCCTCACACTGGGCC
TCGTAGATCTGGTTCATGGTGCTGTTTCCCAGCTCACACATCAGCTTCAGCAGCTCTGGC
TCCCATGAGTCCAGAGTCAGGGACCGAACCTTGGAGCAGTGGACACCCAGGCTCCTGTGG
ATGCCCGAGCACTCGATGCAGAGCAGCACGCCCAGGTTGATGCTGGCCCAGCGCGGGTCC
GGCTGGCCGCAGTCCCCACACTGGCTGTTGCCGGCCACGCCCTGCACCCGCTGCAGCACA
CTCTCGCCCTTGACACTGCGCTCCCTAGAGTCTGTGGCGGAGTCGATGCTGCTCGTGGAC
GGGGACGCCGTGCGGTCCAGCCTCTCGCTGTAGCAGCTGTCGGGGCTCTCCCGGTAGGCG
GACGCGATGCTGGCTTGCACAGCCTGCACCCAGGCTTGCCGCAGCTTCTCCGAGTCAGCC
TGCAGCATGCAGCTCTTGGTGGGTGACAGCGGCCGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCNGAGGGTAGTTCCGCACAAACTTCTTTTCCACATATTTGTCCTTGATCCAGGCCTCC
TTGTCCTGCCTGGGGCTGTTGGCCGTGGGCTTCCTGCTGCCCAGCCCCTCACACTGGGCC
TCGTAGATCTGGTTCATGGTGCTGTTTCCCAGCTCACACATCAGCTTCAGCAGCTCTGGC
TCCCATGAGTCCAGAGTCAGGGACCGAACCTTGGAGCAGTGGACACCCAGGCTCCTGTGG
ATGCCCGAGCACTCGATGCAGAGCAGCACGCCCAGGTTGATGCTGGCCCAGCGCGGGTCC
GGCTGGCCGCAGTCCCCACACTGGCTGTTGCCGGCCACGCCCTGCACCCGCTGCAGCACA
CTCTCGCCCTTGACACTGCGCTCCCTAGAGTCTGTGGCGGAGTCGATGCTGCTCGTGGAC
GGGGACGCCGTGCGGTCCAGCCTCTCGCTGTAGCAGCTGTCGGGGCTCTCCCGGTAGGCG
GACGCGATGCTGGCTTGCACAGCCTGCACCCAGGCTTGCCGCAGCTTCTCCGAGTCAGCC
TGCAGCATGCAGCTCTTGGTGGGTGACAGCGGCCGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
234-445, gnl|bosTau2|chr16 (37942209-37941998) |
|
234-445, gnl|canFam2|chr5 (59472430-59472591) |
|
234-445, gnl|danRer3|chr23 (50809587-50809748) |
|
234-445, gnl|dasNov1|scaffold_57047 (4933-4772) |
|
234-445, gnl|echTel1|scaffold_105727 (224-385) |
|
234-445, gnl|fr1|chrUn (50399124-50399309) |
|
234-445, gnl|galGal2|chr21 (2333886-2333725) |
|
234-445, gnl|hg17|chr1 (1271727-1271888) |
|
234-445, gnl|Hg17|chr1 (1271727-1271938) |
|
234-445, gnl|loxAfr1|scaffold_107482 (4795-4630) |
|
234-445, gnl|mm7|chr4 (154892411-154892250) |
|
234-445, gnl|Mm7|chr4 (154892409-154892198) |
|
234-445, gnl|monDom2|scaffold_229 (145865-145704) |
|
234-445, gnl|oryCun1|scaffold_211229 (4925-5102) |
|
234-445, gnl|rheMac2|chr1 (4365328-4365489) |
|
234-445, gnl|rn3|chr5 (172770495-172770334) |
|
234-445, gnl|tetNig1|chr9 (10292302-10292141) |
|
234-445, gnl|xenTro1|scaffold_414 (634386-634225) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
234-445, gnl|bosTau2|chr16 (37942209-37941998) |
|
234-445, gnl|canFam2|chr5 (59472430-59472591) |
|
234-445, gnl|danRer3|chr23 (50809587-50809748) |
|
234-445, gnl|dasNov1|scaffold_57047 (4933-4772) |
|
234-445, gnl|echTel1|scaffold_105727 (224-385) |
|
234-445, gnl|fr1|chrUn (50399124-50399309) |
|
234-445, gnl|galGal2|chr21 (2333886-2333725) |
|
234-445, gnl|hg17|chr1 (1271727-1271888) |
|
234-445, gnl|Hg17|chr1 (1271727-1271938) |
|
234-445, gnl|loxAfr1|scaffold_107482 (4795-4630) |
|
234-445, gnl|mm7|chr4 (154892411-154892250) |
|
234-445, gnl|Mm7|chr4 (154892409-154892198) |
|
234-445, gnl|monDom2|scaffold_229 (145865-145704) |
|
234-445, gnl|oryCun1|scaffold_211229 (4925-5102) |
|
234-445, gnl|rheMac2|chr1 (4365328-4365489) |
|
234-445, gnl|rn3|chr5 (172770495-172770334) |
|
234-445, gnl|tetNig1|chr9 (10292302-10292141) |
|
234-445, gnl|xenTro1|scaffold_414 (634386-634225) |
