Non-Coding RNA Search

uFN-UNL-P-FN-cx-d-09-0-UNL.s1

Sequence:


               
               GCCGTAAACGTGTCTTCGCGTGGCCGCCGTCGTCCCCGGGCCCCGGGCCCCGGGCCCCGG
CCGGCGCTCTAGGAGCACCCGCACTCCTCCACGATCATGTTCTGGATGTCCTTCTTGATG
ATGTTCTGCCCGTCGTCGTAGTACAGCATGGACATGGGCCTCAGCTTGGTGGGGACGCAG
CACGACTTGAGGTTGGCGAAGGGGCTGTGGCCGCGCATGCGGTAGTGGTTGATGACCGTC
GAGTGGAACGAGAGCGAGGAGCCCGACGTGCCCGCTATGTGGCTGGGGCACTCGCCCTCG
CAGTAGTTGGCGTGGTAGCCGGACGGAGCGATGATCCAGTCGAGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGTAAACGTGTCTTCGCGTGGCCGCCGTCGTCCCCGGGCCCCGGGCCCCGGGCCCCGG
CCGGCGCTCTAGGAGCACCCGCACTCCTCCACGATCATGTTCTGGATGTCCTTCTTGATG
ATGTTCTGCCCGTCGTCGTAGTACAGCATGGACATGGGCCTCAGCTTGGTGGGGACGCAG
CACGACTTGAGGTTGGCGAAGGGGCTGTGGCCGCGCATGCGGTAGTGGTTGATGACCGTC
GAGTGGAACGAGAGCGAGGAGCCCGACGTGCCCGCTATGTGGCTGGGGCACTCGCCCTCG
CAGTAGTTGGCGTGGTAGCCGGACGGAGCGATGATCCAGTCGAGCGGCCGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|33929|emb|CAA28041.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|33929|emb|CAA28041.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               112-341, + strand, RNAz p=0.883181

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               112-341, + strand, RNAz p=0.883181

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-341, gnl|bosTau2|chr4 (46330952-46331297)
               

               
               2-341, gnl|Hg17|chr7 (41502413-41502760)
               

               
               2-341, gnl|Mm7|chr13 (15394683-15394335)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-341, gnl|bosTau2|chr4 (46330952-46331297)
               

               
               2-341, gnl|Hg17|chr7 (41502413-41502760)
               

               
               2-341, gnl|Mm7|chr13 (15394683-15394335)

	2-341, gnl\|bosTau2\|chr4 (46330952-46331297)
	2-341, gnl\|Hg17\|chr7 (41502413-41502760)
	2-341, gnl\|Mm7\|chr13 (15394683-15394335)