uFN-UNL-P-FN-dg-a-06-0-UNL.s1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTGGGGTTAGATGGATGCAGCGCTCTGTCTGAGGAAGCCACTCACTGGGGTCCATGTAG TGGAGAATTCTCAGTATCTTGCAGAGGCATTCTGGGTGATTTTCCTTCACGGCCAATGTC AAGAATGTGCCTCCCAGATTCCACAGCAAGGGTGACAGTCCCTTCTGTCCTACTCCAGAG GTTGCTGCTGAGAACCTTTCCAACAGGGCTTCCAGGGTCAGCAGGCGCACTTCAGGGAAG GAAGACTCTACCAGCTGAGAGAAGGAGATGGGAAGGTCCCTTGTCTGCTCTCCAGCCTGG GCCGCTACCGCCCACACCGCAGCGATGGCCAGCTTGGTGAGGCTCTGGAGGTACTGGGGC AGGCCGGGCACCGTGAAGGTATAGCGGAATCCCGTTATCAGCTCTGATTCTGAGACGATC CTTCTGACTTCCTCCCAGAGGTCCACATGCTCCAGAACTGGCTGGTTGCCTTTTGCGGGT TTGTCAAGGCAGCGAGTCAACAGGAAGAGAATATCAATACACACAGCTCTGGTCACCAAA CATGGATTTTGCCTCGTGGCCAGCCAGAGTTTGGCTTTGGTACAAACGGCGACGTCAGCC AGCTCCTGTTGAAAGTATGTATTCAGTCTGCATTTGGAGTCTGAGAAGGCTTGTAACAAA TGAAAAACCTGGAGAAGTGTCCCATGAATATGGTTTTGCCGGAAACAGCGGCCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTGGGGTTAGATGGATGCAGCGCTCTGTCTGAGGAAGCCACTCACTGGGGTCCATGTAG TGGAGAATTCTCAGTATCTTGCAGAGGCATTCTGGGTGATTTTCCTTCACGGCCAATGTC AAGAATGTGCCTCCCAGATTCCACAGCAAGGGTGACAGTCCCTTCTGTCCTACTCCAGAG GTTGCTGCTGAGAACCTTTCCAACAGGGCTTCCAGGGTCAGCAGGCGCACTTCAGGGAAG GAAGACTCTACCAGCTGAGAGAAGGAGATGGGAAGGTCCCTTGTCTGCTCTCCAGCCTGG GCCGCTACCGCCCACACCGCAGCGATGGCCAGCTTGGTGAGGCTCTGGAGGTACTGGGGC AGGCCGGGCACCGTGAAGGTATAGCGGAATCCCGTTATCAGCTCTGATTCTGAGACGATC CTTCTGACTTCCTCCCAGAGGTCCACATGCTCCAGAACTGGCTGGTTGCCTTTTGCGGGT TTGTCAAGGCAGCGAGTCAACAGGAAGAGAATATCAATACACACAGCTCTGGTCACCAAA CATGGATTTTGCCTCGTGGCCAGCCAGAGTTTGGCTTTGGTACAAACGGCGACGTCAGCC AGCTCCTGTTGAAAGTATGTATTCAGTCTGCATTTGGAGTCTGAGAAGGCTTGTAACAAA TGAAAAACCTGGAGAAGTGTCCCATGAATATGGTTTTGCCGGAAACAGCGGCCGC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 340-459, - strand, RNAz p=0.788096 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 340-459, - strand, RNAz p=0.788096 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_198554, - |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 75-459, gnl|bosTau2|chr11 (22595602-22595986) | |
| 75-459, gnl|canFam2|chr10 (48942502-48942904) | |
| 75-459, gnl|dasNov1|scaffold_1018 (157952-157552) | |
| 75-459, gnl|echTel1|scaffold_276257 (53540-53140) | |
| 75-459, gnl|galGal2|chr3 (21356087-21356519) | |
| 75-459, gnl|hg17|chr2 (43431618-43432019) | |
| 75-459, gnl|Hg17|chr2 (43431621-43432005) | |
| 75-459, gnl|loxAfr1|scaffold_2959 (83071-82670) | |
| 75-459, gnl|mm7|chr17 (82525232-82525625) | |
| 75-459, gnl|Mm7|chr17 (82525235-82525613) | |
| 75-459, gnl|monDom2|scaffold_1 (1848695-1849105) | |
| 75-459, gnl|oryCun1|scaffold_199168 (44422-44017) | |
| 75-459, gnl|panTro1|chr12 (45078219-45078620) | |
| 75-459, gnl|rheMac2|chr13 (43411707-43412108) | |
| 75-459, gnl|rn3|chr6 (7581304-7581693) | |
| 552-670, gnl|bosTau2|chr11 (22642860-22642978) | |
| 552-670, gnl|canFam2|chr10 (48985546-48985648) | |
| 552-670, gnl|dasNov1|scaffold_1018 (99469-99367) | |
| 552-670, gnl|echTel1|scaffold_89922 (3832-3934) | |
| 552-670, gnl|galGal2|chr3 (21381642-21381743) | |
| 552-670, gnl|hg17|chr2 (43482901-43483003) | |
| 552-670, gnl|Hg17|chr2 (43482911-43483029) | |
| 552-670, gnl|loxAfr1|scaffold_2959 (32295-32193) | |
| 552-670, gnl|mm7|chr17 (82567142-82567244) | |
| 552-670, gnl|Mm7|chr17 (82567152-82567273) | |
| 552-670, gnl|monDom2|scaffold_1 (1904733-1904837) | |
| 552-670, gnl|oryCun1|scaffold_200464 (8731-8629) | |
| 552-670, gnl|panTro1|chr12_random (18096150-18096252) | |
| 552-670, gnl|rheMac2|chr13 (43461206-43461308) | |
| 552-670, gnl|rn3|chr6 (7616187-7616289) | |
| 552-670, gnl|xenTro1|scaffold_30 (2012191-2012296) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 75-459, gnl|bosTau2|chr11 (22595602-22595986) | |
| 75-459, gnl|canFam2|chr10 (48942502-48942904) | |
| 75-459, gnl|dasNov1|scaffold_1018 (157952-157552) | |
| 75-459, gnl|echTel1|scaffold_276257 (53540-53140) | |
| 75-459, gnl|galGal2|chr3 (21356087-21356519) | |
| 75-459, gnl|hg17|chr2 (43431618-43432019) | |
| 75-459, gnl|Hg17|chr2 (43431621-43432005) | |
| 75-459, gnl|loxAfr1|scaffold_2959 (83071-82670) | |
| 75-459, gnl|mm7|chr17 (82525232-82525625) | |
| 75-459, gnl|Mm7|chr17 (82525235-82525613) | |
| 75-459, gnl|monDom2|scaffold_1 (1848695-1849105) | |
| 75-459, gnl|oryCun1|scaffold_199168 (44422-44017) | |
| 75-459, gnl|panTro1|chr12 (45078219-45078620) | |
| 75-459, gnl|rheMac2|chr13 (43411707-43412108) | |
| 75-459, gnl|rn3|chr6 (7581304-7581693) | |
| 552-670, gnl|bosTau2|chr11 (22642860-22642978) | |
| 552-670, gnl|canFam2|chr10 (48985546-48985648) | |
| 552-670, gnl|dasNov1|scaffold_1018 (99469-99367) | |
| 552-670, gnl|echTel1|scaffold_89922 (3832-3934) | |
| 552-670, gnl|galGal2|chr3 (21381642-21381743) | |
| 552-670, gnl|hg17|chr2 (43482901-43483003) | |
| 552-670, gnl|Hg17|chr2 (43482911-43483029) | |
| 552-670, gnl|loxAfr1|scaffold_2959 (32295-32193) | |
| 552-670, gnl|mm7|chr17 (82567142-82567244) | |
| 552-670, gnl|Mm7|chr17 (82567152-82567273) | |
| 552-670, gnl|monDom2|scaffold_1 (1904733-1904837) | |
| 552-670, gnl|oryCun1|scaffold_200464 (8731-8629) | |
| 552-670, gnl|panTro1|chr12_random (18096150-18096252) | |
| 552-670, gnl|rheMac2|chr13 (43461206-43461308) | |
| 552-670, gnl|rn3|chr6 (7616187-7616289) | |
| 552-670, gnl|xenTro1|scaffold_30 (2012191-2012296) |