Non-Coding RNA Search

unkn-54-33

Sequence:


               
               ATTAACCCTCACTAAAGATCTGACTGGCTGAATGGATACaaaaacaagacccatatctat
gttgtcttcaagagacccctttcacttctagggacacatacaaattgaaagtgagaggat
ggaAGAAAGTATTCCATGCAAACGGGGATCAAAGCTGGAGTAGCAATACTCCTAACAGAC
AAAATAGACTTTAACATGAAGAATATTTTAAGGGACAAGGAAGGACATTACATAATGATC
AAAGAATCAATCAAAAAAAAAGATATCACTCAGCATAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTAACCCTCACTAAAGATCTGACTGGCTGAATGGATACaaaaacaagacccatatctat
gttgtcttcaagagacccctttcacttctagggacacatacaaattgaaagtgagaggat
ggaAGAAAGTATTCCATGCAAACGGGGATCAAAGCTGGAGTAGCAATACTCCTAACAGAC
AAAATAGACTTTAACATGAAGAATATTTTAAGGGACAAGGAAGGACATTACATAATGATC
AAAGAATCAATCAAAAAAAAAGATATCACTCAGCATAATG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61886575|ref|XP_586939.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61886575|ref|XP_586939.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               53-205, + strand, RNAz p=0.926601

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               53-205, + strand, RNAz p=0.926601

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               5-278, gnl|bosTau2|chr4 (6211821-6211539)
               


               
               11-273, gnl|bosTau2|chr25 (18175690-18175953)
               


               
               12-269, gnl|bosTau2|chr10 (7281650-7281387)
               


               
               14-266, gnl|bosTau2|chr10 (29846205-29845946)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-278, gnl|bosTau2|chr4 (6211821-6211539)
               


               
               11-273, gnl|bosTau2|chr25 (18175690-18175953)
               


               
               12-269, gnl|bosTau2|chr10 (7281650-7281387)
               


               
               14-266, gnl|bosTau2|chr10 (29846205-29845946)

	5-278, gnl\|bosTau2\|chr4 (6211821-6211539)

	11-273, gnl\|bosTau2\|chr25 (18175690-18175953)

	12-269, gnl\|bosTau2\|chr10 (7281650-7281387)

	14-266, gnl\|bosTau2\|chr10 (29846205-29845946)