Non-Coding RNA Search

unkn-AR062C07IPBCBC07S

Sequence:


               
               AGGAGACAGGGCTCAGGATGAGGAGCGCTCCTCGGGCAGCCTGGCGGAGCAGGGTGCCCA
CCGGGCCCCCAGCAGTATCTGCGCAGCCTGCCAGCAGCACGTGCACTTGGTGCAGCGTTA
CCTGGCCGACGGCAAGCTGTACCACCGGCACTGCTTCCGGTGAGTGGCGGGAGCCTGGGG
GCGGGGAGCTCCCGTGGGTCGGCACCAGGGTGTGCCAGGCCCCCTGCCAGGCGCTTCATG
CATCGTGCGTATCCCTGCTTTGCTGAAATGAACAAACTAAGGCCAAGTGAAGGGAGAAGA
CTTGCTCAGTCACTGAATTAAGACAGAAATAGGCCAGAGCTCTTTTTTTTCTTTGACTGT
GAGagttcccgggccagggatcgaacctgcgccacggcagtgacaatgtcggatccttNN
NNNGCTNNNCCACAAGGGANCNNNTNNNNNACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAGACAGGGCTCAGGATGAGGAGCGCTCCTCGGGCAGCCTGGCGGAGCAGGGTGCCCA
CCGGGCCCCCAGCAGTATCTGCGCAGCCTGCCAGCAGCACGTGCACTTGGTGCAGCGTTA
CCTGGCCGACGGCAAGCTGTACCACCGGCACTGCTTCCGGTGAGTGGCGGGAGCCTGGGG
GCGGGGAGCTCCCGTGGGTCGGCACCAGGGTGTGCCAGGCCCCCTGCCAGGCGCTTCATG
CATCGTGCGTATCCCTGCTTTGCTGAAATGAACAAACTAAGGCCAAGTGAAGGGAGAAGA
CTTGCTCAGTCACTGAATTAAGACAGAAATAGGCCAGAGCTCTTTTTTTTCTTTGACTGT
GAGagttcccgggccagggatcgaacctgcgccacggcagtgacaatgtcggatccttNN
NNNGCTNNNCCACAAGGGANCNNNTNNNNNACA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47201290|emb|CAF89060.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47201290|emb|CAF89060.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               53-172, - strand, RNAz p=0.798897

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               53-172, - strand, RNAz p=0.798897

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               14-344, gnl|bosTau2|chr5 (67079518-67079190)
               

               
               14-344, gnl|Hg17|chr22 (36639540-36639923)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-344, gnl|bosTau2|chr5 (67079518-67079190)
               

               
               14-344, gnl|Hg17|chr22 (36639540-36639923)

	14-344, gnl\|bosTau2\|chr5 (67079518-67079190)
	14-344, gnl\|Hg17\|chr22 (36639540-36639923)