unkn-AR063G12IPBCCG12S
|
AATCAGCNNGACCTTTAGCGGAATCATGACCATGTTGAACATGCAGTTTGTTGTTCGGGT
GAGGAGATGGGACAACTCTGTGAAGAAATCATCAAGGGTGATGGACCTCAAAGGCCAGAT
GATCTACATCATTGAATCCAGCGCGATCTTGTTCTTGGGGTCGCCCTGTGTGGACAGACT
GGAAGACTTCACGGGCCGAGGGCTCTACCTCTCTGACATCCCCATCCACAACGCGCTGAG
GGATGTGGTTCTGATTGGAGAGCAGGCCAGGGCTCAGGACGGCCTGAAGAAGNNNCTTGG
CAAGCTGAAGGCCACACTGGAGCAGGCCCACCAAGCGCTGGAGGAGGAGAAGAAGANGNC
AGTGGACCTGCTGTGCTCCATCTTCCCCAGCG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AATCAGCNNGACCTTTAGCGGAATCATGACCATGTTGAACATGCAGTTTGTTGTTCGGGT
GAGGAGATGGGACAACTCTGTGAAGAAATCATCAAGGGTGATGGACCTCAAAGGCCAGAT
GATCTACATCATTGAATCCAGCGCGATCTTGTTCTTGGGGTCGCCCTGTGTGGACAGACT
GGAAGACTTCACGGGCCGAGGGCTCTACCTCTCTGACATCCCCATCCACAACGCGCTGAG
GGATGTGGTTCTGATTGGAGAGCAGGCCAGGGCTCAGGACGGCCTGAAGAAGNNNCTTGG
CAAGCTGAAGGCCACACTGGAGCAGGCCCACCAAGCGCTGGAGGAGGAGAAGAAGANGNC
AGTGGACCTGCTGTGCTCCATCTTCCCCAGCG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
97-390, gnl|bosTau2|chr7 (23598566-23598273) |
|
97-390, gnl|canFam2|chr15 (56237726-56238257) |
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97-390, gnl|danRer3|chr1 (24893854-24894358) |
|
97-390, gnl|dasNov1|scaffold_14817 (44186-43650) |
|
97-390, gnl|echTel1|scaffold_183567 (679-150) |
|
97-390, gnl|fr1|chrUn (117593306-117592763) |
|
97-390, gnl|galGal2|chr4 (21377467-21377990) |
|
97-390, gnl|hg17|chr4 (156991826-156992363) |
|
97-390, gnl|Hg17|chr4 (156991854-156992147) |
|
97-390, gnl|loxAfr1|scaffold_2846 (114334-114876) |
|
97-390, gnl|mm7|chr3 (82211168-82210630) |
|
97-390, gnl|Mm7|chr3 (82211135-82210842) |
|
97-390, gnl|monDom2|scaffold_9 (26554759-26555298) |
|
97-390, gnl|oryCun1|scaffold_104628 (4802-4262) |
|
97-390, gnl|panTro1|chr3 (174407017-174407554) |
|
97-390, gnl|rheMac2|chr5 (147904297-147904834) |
|
97-390, gnl|rn3|chr2 (173719297-173718761) |
|
97-390, gnl|tetNig1|chrUn_random (8292864-8293385) |
|
97-390, gnl|xenTro1|scaffold_93 (169402-168878) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
97-390, gnl|bosTau2|chr7 (23598566-23598273) |
|
97-390, gnl|canFam2|chr15 (56237726-56238257) |
|
97-390, gnl|danRer3|chr1 (24893854-24894358) |
|
97-390, gnl|dasNov1|scaffold_14817 (44186-43650) |
|
97-390, gnl|echTel1|scaffold_183567 (679-150) |
|
97-390, gnl|fr1|chrUn (117593306-117592763) |
|
97-390, gnl|galGal2|chr4 (21377467-21377990) |
|
97-390, gnl|hg17|chr4 (156991826-156992363) |
|
97-390, gnl|Hg17|chr4 (156991854-156992147) |
|
97-390, gnl|loxAfr1|scaffold_2846 (114334-114876) |
|
97-390, gnl|mm7|chr3 (82211168-82210630) |
|
97-390, gnl|Mm7|chr3 (82211135-82210842) |
|
97-390, gnl|monDom2|scaffold_9 (26554759-26555298) |
|
97-390, gnl|oryCun1|scaffold_104628 (4802-4262) |
|
97-390, gnl|panTro1|chr3 (174407017-174407554) |
|
97-390, gnl|rheMac2|chr5 (147904297-147904834) |
|
97-390, gnl|rn3|chr2 (173719297-173718761) |
|
97-390, gnl|tetNig1|chrUn_random (8292864-8293385) |
|
97-390, gnl|xenTro1|scaffold_93 (169402-168878) |
