Non-Coding RNA Search

unkn-AR069H10iLNCH10S

Sequence:


               
               CAGGAACTAGGATTCCANCTCTCTGCAATGCCATCCTTCCCGCAGGCTCCTCTCCCAGGC
AGTCTCAGCCTTCAGCCGGTGGAAGCAGGGTATCCGTTTTTCCCATTAACTGGGgcaaaa
ttctcagggccatcactgattggcccagcttgggtcacatgcccattcctgagcctatca
ctggaaccagggagctggagtgctttgattggctgggccaggatcaGAAGCCCATCCTAG
AGCTGACGCGGGGCTCCTTCCCTGCCCAACCACATCAACTATGAGAAGAGGAAGGGGAAT
TTTCTGAAAAAAAATGGTGGCCNNNCCACTTGCTTTTTAAATTGGTCTCAGGTTTTTAAA
GAATTTAGCCNNTGCGGCATANNCCAGCAGCTTCAGCTCCAGTTTGACCCCTAGCCCNNN
AACTNNNACATGCTTTGGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGAACTAGGATTCCANCTCTCTGCAATGCCATCCTTCCCGCAGGCTCCTCTCCCAGGC
AGTCTCAGCCTTCAGCCGGTGGAAGCAGGGTATCCGTTTTTCCCATTAACTGGGgcaaaa
ttctcagggccatcactgattggcccagcttgggtcacatgcccattcctgagcctatca
ctggaaccagggagctggagtgctttgattggctgggccaggatcaGAAGCCCATCCTAG
AGCTGACGCGGGGCTCCTTCCCTGCCCAACCACATCAACTATGAGAAGAGGAAGGGGAAT
TTTCTGAAAAAAAATGGTGGCCNNNCCACTTGCTTTTTAAATTGGTCTCAGGTTTTTAAA
GAATTTAGCCNNTGCGGCATANNCCAGCAGCTTCAGCTCCAGTTTGACCCCTAGCCCNNN
AACTNNNACATGCTTTGGGCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-234, + strand, RNAz p=0.86696

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-234, + strand, RNAz p=0.86696

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               186-331, - strand, RNAmicro p=0.949476

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               186-331, - strand, RNAmicro p=0.949476

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-370, gnl|bosTau2|chr7 (4396998-4397367)
               

               
               1-370, gnl|Hg17|chr19 (18032671-18031979)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-370, gnl|bosTau2|chr7 (4396998-4397367)
               

               
               1-370, gnl|Hg17|chr19 (18032671-18031979)

	1-370, gnl\|bosTau2\|chr7 (4396998-4397367)
	1-370, gnl\|Hg17\|chr19 (18032671-18031979)