unkn-AR071G06iSPBG06S
|
TGAAGTTGGTGGAGAGACTGACAATGATGAAAGTCTTGTTCCTGTTCCTGCTAACAGTTA
TTTAGGCTTTTCTTTGGACTCAGGGAAAGGTATTGTTTCCAAAGATGAGATTACTTTTGT
ATCTGGTGCTCCTAGAGCCAATCACAGCGGAGCTGTGGTTTTGCTTAAAAGAGACCTGAA
GTCTGCACATCTTCTCCCCGAGCACATATTTGATGGGGAAGGGCTGGCTTCTTCATTTGG
CTATGATGTGGCAGTGGTGGACCTCAACAGCGACGGGTGGCAAGATATAGTTATTGGGGC
CCCACAGTATTTTGATAGAAGTGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGAACCA
GCAANNNCGATGGAAAAACGTCAAGCCAATTCGTCTTAACGGAACNNNAGATTCTATGTT
TNNCGTTGCNNTCAAAAATATTGGAGATATTAATCAAGACGNNNACCCAGATATTGCAGT
TGGAGCACCCTACGATGGCAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGAAGTTGGTGGAGAGACTGACAATGATGAAAGTCTTGTTCCTGTTCCTGCTAACAGTTA
TTTAGGCTTTTCTTTGGACTCAGGGAAAGGTATTGTTTCCAAAGATGAGATTACTTTTGT
ATCTGGTGCTCCTAGAGCCAATCACAGCGGAGCTGTGGTTTTGCTTAAAAGAGACCTGAA
GTCTGCACATCTTCTCCCCGAGCACATATTTGATGGGGAAGGGCTGGCTTCTTCATTTGG
CTATGATGTGGCAGTGGTGGACCTCAACAGCGACGGGTGGCAAGATATAGTTATTGGGGC
CCCACAGTATTTTGATAGAAGTGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGAACCA
GCAANNNCGATGGAAAAACGTCAAGCCAATTCGTCTTAACGGAACNNNAGATTCTATGTT
TNNCGTTGCNNTCAAAAATATTGGAGATATTAATCAAGACGNNNACCCAGATATTGCAGT
TGGAGCACCCTACGATGGCAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
58-278, gnl|bosTau2|chr2 (17175700-17175480) |
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58-278, gnl|canFam2|chr36 (19843218-19843451) |
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58-278, gnl|danRer3|chr9 (7110927-7110695) |
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58-278, gnl|echTel1|scaffold_306929 (7030-7264) |
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58-278, gnl|fr1|chrUn (7360464-7360689) |
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58-278, gnl|galGal2|chr7 (18443013-18442773) |
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58-278, gnl|hg17|chr2 (173164280-173164513) |
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58-278, gnl|Hg17|chr2 (173164282-173164502) |
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58-278, gnl|loxAfr1|scaffold_2760 (19143-19376) |
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58-278, gnl|mm7|chr2 (71669209-71669442) |
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58-278, gnl|Mm7|chr2 (71669211-71669431) |
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58-278, gnl|monDom2|scaffold_2 (71454272-71454505) |
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58-278, gnl|oryCun1|scaffold_212494 (77591-77358) |
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58-278, gnl|panTro1|chr13 (62801548-62801781) |
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58-278, gnl|rheMac2|chr12 (36124109-36124342) |
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58-278, gnl|rn3|chr3 (54141544-54141777) |
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58-278, gnl|tetNig1|chr2 (11392510-11392287) |
|
58-278, gnl|xenTro1|scaffold_65 (1537396-1537164) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
58-278, gnl|bosTau2|chr2 (17175700-17175480) |
|
58-278, gnl|canFam2|chr36 (19843218-19843451) |
|
58-278, gnl|danRer3|chr9 (7110927-7110695) |
|
58-278, gnl|echTel1|scaffold_306929 (7030-7264) |
|
58-278, gnl|fr1|chrUn (7360464-7360689) |
|
58-278, gnl|galGal2|chr7 (18443013-18442773) |
|
58-278, gnl|hg17|chr2 (173164280-173164513) |
|
58-278, gnl|Hg17|chr2 (173164282-173164502) |
|
58-278, gnl|loxAfr1|scaffold_2760 (19143-19376) |
|
58-278, gnl|mm7|chr2 (71669209-71669442) |
|
58-278, gnl|Mm7|chr2 (71669211-71669431) |
|
58-278, gnl|monDom2|scaffold_2 (71454272-71454505) |
|
58-278, gnl|oryCun1|scaffold_212494 (77591-77358) |
|
58-278, gnl|panTro1|chr13 (62801548-62801781) |
|
58-278, gnl|rheMac2|chr12 (36124109-36124342) |
|
58-278, gnl|rn3|chr3 (54141544-54141777) |
|
58-278, gnl|tetNig1|chr2 (11392510-11392287) |
|
58-278, gnl|xenTro1|scaffold_65 (1537396-1537164) |
