Non-Coding RNA Search

unkn-AR15G11

Sequence:


               
               CCCCCCCGAGACTANTTTTTTTTTTTTTTTTTTTTTTTTCTCTTTTTTTccaggggaaag
cgcgaacgcagtcccccactaccacaaattatgcagtcgagtttcccacatttggggaaa
tcgcaggggtcagcacatccggagtgcaatggataagcctcgccctgggaaaaccacctt
cgtgatcaTTTTTTTTTTTTCTTCTNNNTAATTGTTATCTTTTAGAGACAAGATTTTAAA
AATACTAATGAggagttcccatggtggcgcagtggaaacaaatctgactaggaaccatga
ggttgtgggtttgatcgctggcctcgctcagtgggttaaggatccagtgttgccgtgagc
tgtggtgtaggtcgcagncatggctcggatcccgagttgctgtggctgcggcataggctn
ncggcnnnagctctgattcaacccctgcctgggaaccnnnatacgcagcnnntgcg

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCCCCGAGACTANTTTTTTTTTTTTTTTTTTTTTTTTCTCTTTTTTTccaggggaaag
cgcgaacgcagtcccccactaccacaaattatgcagtcgagtttcccacatttggggaaa
tcgcaggggtcagcacatccggagtgcaatggataagcctcgccctgggaaaaccacctt
cgtgatcaTTTTTTTTTTTTCTTCTNNNTAATTGTTATCTTTTAGAGACAAGATTTTAAA
AATACTAATGAggagttcccatggtggcgcagtggaaacaaatctgactaggaaccatga
ggttgtgggtttgatcgctggcctcgctcagtgggttaaggatccagtgttgccgtgagc
tgtggtgtaggtcgcagncatggctcggatcccgagttgctgtggctgcggcataggctn
ncggcnnnagctctgattcaacccctgcctgggaaccnnnatacgcagcnnntgcg

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               204-52, RF00003;U1; (AL831763.6/136377-136528), RaveNnA Score=111.78

ncRNA annotation: 1 entry(ies)

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PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               204-52, RF00003;U1; (AL831763.6/136377-136528), RaveNnA Score=111.78