Non-Coding RNA Search

unkn-AR7D4

Sequence:


               
               ACCAGGCAATTCATGGTNANACAGTGTGGGCACACAACCTCATCGCCATTGCTCGTCTTC
GTGGCTCTGATCTAAAAGTACTCGAAGTCACGGAAGAAAGCATTGATTTTGACCAAGGTG
AACTGGCCGACCAGGATGTGGATCCAGTGCACAACCTTATTGAGCAGGTATCCCTGGGCC
TGGGTCAACCTTGGCATGCGGTCATGGACATCGAATCACTCAGTGTCTTCACTGAACCAA
ATCGTCATTTTTACAGAGAGATGCAAAGCTNNNNCGAAGACATTTAGCTTTTTTTTAAAT
GTACAATTCCTNNNNNNACATATGCAAGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAGGCAATTCATGGTNANACAGTGTGGGCACACAACCTCATCGCCATTGCTCGTCTTC
GTGGCTCTGATCTAAAAGTACTCGAAGTCACGGAAGAAAGCATTGATTTTGACCAAGGTG
AACTGGCCGACCAGGATGTGGATCCAGTGCACAACCTTATTGAGCAGGTATCCCTGGGCC
TGGGTCAACCTTGGCATGCGGTCATGGACATCGAATCACTCAGTGTCTTCACTGAACCAA
ATCGTCATTTTTACAGAGAGATGCAAAGCTNNNNCGAAGACATTTAGCTTTTTTTTAAAT
GTACAATTCCTNNNNNNACATATGCAAGTA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|27769245|gb|AAH42535.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|27769245|gb|AAH42535.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               89-208, + strand, RNAz p=0.558573

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               89-208, + strand, RNAz p=0.558573

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-330, gnl|bosTau2|chr21 (33425945-33426264)
               

               
               10-330, gnl|Hg17|chr14 (38938748-38938429)
               

               
               10-330, gnl|Mm7|chr12 (57137579-57137260)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-330, gnl|bosTau2|chr21 (33425945-33426264)
               

               
               10-330, gnl|Hg17|chr14 (38938748-38938429)
               

               
               10-330, gnl|Mm7|chr12 (57137579-57137260)

	10-330, gnl\|bosTau2\|chr21 (33425945-33426264)
	10-330, gnl\|Hg17\|chr14 (38938748-38938429)
	10-330, gnl\|Mm7\|chr12 (57137579-57137260)