Non-Coding RNA Search

unkn-AU055656

Sequence:


               
               ACATGGTTCGGAGCAATAGAAACATCATCATCATGTTTGTGCTTCTATTTCAGGTATAGG
AATTATCAAATAATTGGTTCTTTCTAAACTTTTGTCCCATTTCACGTTCCTGCTTCTTTA
GCATGTGCAATACTTTCTGTGCCAATAGCGTCTAATCCGTGTGCTCTAGAGAAAGCTCAG
ACCCTTTGGGGTTTTTCCTTATTCGGTCCATCTTTCCTGTCCTGGCCAGAGAAGGGCTGG
AAGGAAGGAGCCAAGAAGGGGACTGCCTCCTGCTGCGCGTTCCCCCTGCTGCGGATGCCG
AGGCCCGGAGCAGGGTGCTCTGCGGCGCCCCGTGTGTCTGGCCGTGTTGCAGAAAGAGCA
AGCAAAGGAGATGGAGGGGGAGAACGGCACTCCCCCCACCAGCACGAGGAATGGTTGGAC
GTGGAGGGAGGAGGCAGAGGCCTTTCTAAGACGCACTCTGGAGCCATAGAGCCAGGATCC
ACCCACGGTCCACGGTCTCTTCCGAGAGCGGGCAGCCCCCTCCTCCTCCTCCCTGTGTCC
TTGGGACTTGGAGCCGCACCTCCGCGCGCAGGCAGGAAGCGTGGCCTGCTGTGCACGCTC
CGGGCACCCGGCCAGCAGCTGTGGAGGGGGCCCCCTGCGCACCCTGGTCACCGCTCCTCT
GTGGCAGCTTTCTCTTCAAATAGGAAGACCATCTCGAGGACGGGGCTCTCCTCTTGTTTG
CAGACGTTGGCGAGCCCGAGGCTCTCAGAGCAGCCTTTGTCACCACACCTGCGTAGANCC
TGAYAGGGCAGGCGTAGAAATTCTTCGGTGCCGTGCAGCCTGCGANGATCAGCTGTGTGC
CTCGTACCTGCACGGGCGGCCGCTCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATGGTTCGGAGCAATAGAAACATCATCATCATGTTTGTGCTTCTATTTCAGGTATAGG
AATTATCAAATAATTGGTTCTTTCTAAACTTTTGTCCCATTTCACGTTCCTGCTTCTTTA
GCATGTGCAATACTTTCTGTGCCAATAGCGTCTAATCCGTGTGCTCTAGAGAAAGCTCAG
ACCCTTTGGGGTTTTTCCTTATTCGGTCCATCTTTCCTGTCCTGGCCAGAGAAGGGCTGG
AAGGAAGGAGCCAAGAAGGGGACTGCCTCCTGCTGCGCGTTCCCCCTGCTGCGGATGCCG
AGGCCCGGAGCAGGGTGCTCTGCGGCGCCCCGTGTGTCTGGCCGTGTTGCAGAAAGAGCA
AGCAAAGGAGATGGAGGGGGAGAACGGCACTCCCCCCACCAGCACGAGGAATGGTTGGAC
GTGGAGGGAGGAGGCAGAGGCCTTTCTAAGACGCACTCTGGAGCCATAGAGCCAGGATCC
ACCCACGGTCCACGGTCTCTTCCGAGAGCGGGCAGCCCCCTCCTCCTCCTCCCTGTGTCC
TTGGGACTTGGAGCCGCACCTCCGCGCGCAGGCAGGAAGCGTGGCCTGCTGTGCACGCTC
CGGGCACCCGGCCAGCAGCTGTGGAGGGGGCCCCCTGCGCACCCTGGTCACCGCTCCTCT
GTGGCAGCTTTCTCTTCAAATAGGAAGACCATCTCGAGGACGGGGCTCTCCTCTTGTTTG
CAGACGTTGGCGAGCCCGAGGCTCTCAGAGCAGCCTTTGTCACCACACCTGCGTAGANCC
TGAYAGGGCAGGCGTAGAAATTCTTCGGTGCCGTGCAGCCTGCGANGATCAGCTGTGTGC
CTCGTACCTGCACGGGCGGCCGCTCGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               161-264, + strand, RNAz p=0.999928

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               161-264, + strand, RNAz p=0.999928

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_000332, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_000332, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-843, gnl|bosTau2|chr23 (35916350-35917210)
               

               
               4-843, gnl|Hg17|chr6 (16411885-16411032)
               

               
               4-843, gnl|Mm7|chr13 (45004790-45003990)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-843, gnl|bosTau2|chr23 (35916350-35917210)
               

               
               4-843, gnl|Hg17|chr6 (16411885-16411032)
               

               
               4-843, gnl|Mm7|chr13 (45004790-45003990)

	4-843, gnl\|bosTau2\|chr23 (35916350-35917210)
	4-843, gnl\|Hg17\|chr6 (16411885-16411032)
	4-843, gnl\|Mm7\|chr13 (45004790-45003990)