Non-Coding RNA Search

unkn-ESTPBB1

Sequence:


               
               GATGAGTCCTGACCGACTAAGTCAGAAGGCCCTTTGGCAGGGCAAGCAGAGTTGAGTTCT
AAAAATTCCTGTAGCAGCAAAATTGACCTCTTCTCACATAGAATGCGGCTGGAAGAGCCA
CAGATCTCTTTATGATGTAAGCTCAAGGGCCAAGAGGAGAGGCTGGCCAGAGACCGGCCA
GTGGTAAAGCAGCTGACATCATCTCTCCTGAATTGGTACGCAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGAGTCCTGACCGACTAAGTCAGAAGGCCCTTTGGCAGGGCAAGCAGAGTTGAGTTCT
AAAAATTCCTGTAGCAGCAAAATTGACCTCTTCTCACATAGAATGCGGCTGGAAGAGCCA
CAGATCTCTTTATGATGTAAGCTCAAGGGCCAAGAGGAGAGGCTGGCCAGAGACCGGCCA
GTGGTAAAGCAGCTGACATCATCTCTCCTGAATTGGTACGCAGTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               98-214, - strand, RNAz p=0.517625

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               98-214, - strand, RNAz p=0.517625

Aligned organism(s): 10 entry(ies)

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Aligned organism(s): 10 entry(ies)

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               19-214, gnl|bosTau2|chr13 (59924202-59924009)
               

               
               19-214, gnl|canFam2|chr24 (39426093-39426441)
               

               
               19-214, gnl|echTel1|scaffold_316572 (43892-43576)
               

               
               19-214, gnl|hg17|chr20 (47963430-47963764)
               

               
               19-214, gnl|Hg17|chr20 (47963561-47963755)
               

               
               19-214, gnl|loxAfr1|scaffold_5189 (67492-67815)
               

               
               19-214, gnl|mm7|chr2 (167231712-167231978)
               

               
               19-214, gnl|panTro1|chr21 (50664134-50664468)
               

               
               19-214, gnl|rheMac2|chr10 (14570531-14570197)
               

               
               19-214, gnl|rn3|chr3 (158545333-158545635)

Aligned organism(s): 10 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-214, gnl|bosTau2|chr13 (59924202-59924009)
               

               
               19-214, gnl|canFam2|chr24 (39426093-39426441)
               

               
               19-214, gnl|echTel1|scaffold_316572 (43892-43576)
               

               
               19-214, gnl|hg17|chr20 (47963430-47963764)
               

               
               19-214, gnl|Hg17|chr20 (47963561-47963755)
               

               
               19-214, gnl|loxAfr1|scaffold_5189 (67492-67815)
               

               
               19-214, gnl|mm7|chr2 (167231712-167231978)
               

               
               19-214, gnl|panTro1|chr21 (50664134-50664468)
               

               
               19-214, gnl|rheMac2|chr10 (14570531-14570197)
               

               
               19-214, gnl|rn3|chr3 (158545333-158545635)

	19-214, gnl\|bosTau2\|chr13 (59924202-59924009)
	19-214, gnl\|canFam2\|chr24 (39426093-39426441)
	19-214, gnl\|echTel1\|scaffold_316572 (43892-43576)
	19-214, gnl\|hg17\|chr20 (47963430-47963764)
	19-214, gnl\|Hg17\|chr20 (47963561-47963755)
	19-214, gnl\|loxAfr1\|scaffold_5189 (67492-67815)
	19-214, gnl\|mm7\|chr2 (167231712-167231978)
	19-214, gnl\|panTro1\|chr21 (50664134-50664468)
	19-214, gnl\|rheMac2\|chr10 (14570531-14570197)
	19-214, gnl\|rn3\|chr3 (158545333-158545635)