Non-Coding RNA Search

unkn-F_C0001825a_G12

Sequence:


               
               GCGTGGTCGCGGCCGAGGTACTAGGGGCTTCCCCAAATGAACCTTGGAGACACATCAGGG
CCTCCCCAGTCCTCGCTTGGCCAAAGGTCAGCTGTGCTTTCACAACATCCTGCCAATTCT
CGTTTCTCTTTCACTTTCTGAGAAATGAGGGGGAAAACACCACCCAAACAAACGAAAATA
GACATCCAGCTAAGCCGGATGCCTACGGCTTGAAAGCCAAGGGTTCACCATACATTGCAG
TTTTAATAAAGGAAAACAAACAAAATAATAATCCTGACCCCTTGCCAAGCTAATAGGCTT
CCAGACCAAGGATCCCATTCAAGAAAAGGCTACTTGGCTGTATTTGGAAGTTCATTCCCA
CGGGCAGAGCTCTGCTCATGGCAAGGAGCTGGCATCTTAAGCAACATCTAGAAGTGTTCC
TTATGATTTGGAGAAGTAGTTATTTCGTGGGAAGAACATAGAAAGCTCCTCCTACCAAGG
CAGGTGCCTGGAATGGGCCTCTTCCAAAAGAAGGCAGGTGGGAAACAGAACAAGACACTG
AAATAAGCAGGACAGGGAGTTAGGAGAACGTGGTTCTGGACCTAGTGCCACCATGAACCC
AGCTGCAGGATTCTCAGCAGAATCAATCATCCCACCAGCTTCAACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGTGGTCGCGGCCGAGGTACTAGGGGCTTCCCCAAATGAACCTTGGAGACACATCAGGG
CCTCCCCAGTCCTCGCTTGGCCAAAGGTCAGCTGTGCTTTCACAACATCCTGCCAATTCT
CGTTTCTCTTTCACTTTCTGAGAAATGAGGGGGAAAACACCACCCAAACAAACGAAAATA
GACATCCAGCTAAGCCGGATGCCTACGGCTTGAAAGCCAAGGGTTCACCATACATTGCAG
TTTTAATAAAGGAAAACAAACAAAATAATAATCCTGACCCCTTGCCAAGCTAATAGGCTT
CCAGACCAAGGATCCCATTCAAGAAAAGGCTACTTGGCTGTATTTGGAAGTTCATTCCCA
CGGGCAGAGCTCTGCTCATGGCAAGGAGCTGGCATCTTAAGCAACATCTAGAAGTGTTCC
TTATGATTTGGAGAAGTAGTTATTTCGTGGGAAGAACATAGAAAGCTCCTCCTACCAAGG
CAGGTGCCTGGAATGGGCCTCTTCCAAAAGAAGGCAGGTGGGAAACAGAACAAGACACTG
AAATAAGCAGGACAGGGAGTTAGGAGAACGTGGTTCTGGACCTAGTGCCACCATGAACCC
AGCTGCAGGATTCTCAGCAGAATCAATCATCCCACCAGCTTCAACAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               137-279, - strand, RNAz p=0.979782

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               137-279, - strand, RNAz p=0.979782

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               20-607, gnl|bosTau2|chr26 (19223322-19223923)
               

               
               20-607, gnl|Hg17|chr10 (112254031-112253453)
               

               
               20-607, gnl|Mm7|chr19 (53434972-53434414)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-607, gnl|bosTau2|chr26 (19223322-19223923)
               

               
               20-607, gnl|Hg17|chr10 (112254031-112253453)
               

               
               20-607, gnl|Mm7|chr19 (53434972-53434414)

	20-607, gnl\|bosTau2\|chr26 (19223322-19223923)
	20-607, gnl\|Hg17\|chr10 (112254031-112253453)
	20-607, gnl\|Mm7\|chr19 (53434972-53434414)