Non-Coding RNA Search

unkn-HYG602653886.R1

Sequence:


               
               ATAAGGAGACTTGGTGAACACTGTCTCTTTCCAGAGATCAGGGGTGAGATAGCTGTAGGT
CTTGGAAATGGCGTCAAAGGTGGCCTTGGCGAAGTTGCCCAGGTGGCAGTGCAGCCCCTG
GCAGAGGTGTAGCAGTCATCAATTCCTGCCATCATCAGCAGCTTCTTGGGCACAGGGGCT
GAGACAATGCCAGTGCCCCTGGGGGCAGGGATGAGGCGCACCAGCACGGAGCCACAGCGG
CCAGTCACCTTGCAAGGGACGGTATGGGGCTTGCCGATCTTGTTCCCCCAGTAGCCTCGC
CGCACAGGGACAATGGAGAGTTTGGCCAGAATGATGGCCCCCCGGATGGCAGTGGCTACC
TCCTTAGAGCACTTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAGGAGACTTGGTGAACACTGTCTCTTTCCAGAGATCAGGGGTGAGATAGCTGTAGGT
CTTGGAAATGGCGTCAAAGGTGGCCTTGGCGAAGTTGCCCAGGTGGCAGTGCAGCCCCTG
GCAGAGGTGTAGCAGTCATCAATTCCTGCCATCATCAGCAGCTTCTTGGGCACAGGGGCT
GAGACAATGCCAGTGCCCCTGGGGGCAGGGATGAGGCGCACCAGCACGGAGCCACAGCGG
CCAGTCACCTTGCAAGGGACGGTATGGGGCTTGCCGATCTTGTTCCCCCAGTAGCCTCGC
CGCACAGGGACAATGGAGAGTTTGGCCAGAATGATGGCCCCCCGGATGGCAGTGGCTACC
TCCTTAGAGCACTTGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|2920833|gb|AAC04625.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|2920833|gb|AAC04625.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               80-198, + strand, RNAz p=0.584441

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-198, + strand, RNAz p=0.584441

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-338, gnl|bosTau2|chr13 (48444702-48444369)
               

               
               1-338, gnl|Hg17|chr17 (19289959-19290315)
               

               
               1-338, gnl|Mm7|chr6 (122733619-122733281)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-338, gnl|bosTau2|chr13 (48444702-48444369)
               

               
               1-338, gnl|Hg17|chr17 (19289959-19290315)
               

               
               1-338, gnl|Mm7|chr6 (122733619-122733281)

	1-338, gnl\|bosTau2\|chr13 (48444702-48444369)
	1-338, gnl\|Hg17\|chr17 (19289959-19290315)
	1-338, gnl\|Mm7\|chr6 (122733619-122733281)