Non-Coding RNA Search

unkn-LQG602768221.R1

Sequence:


               
               TTTTTTTAGGTAGTAATAAAACTTTATTGAGGATGATGATGGTGATGATAATATTATTAG
CATTTGGTATTAAGAGATGATTTCAGCCTTTGTTCCCTTCCCACACACATTTCTTAAAAT
TTCAACCTTTGAAAGCTTCCCACGTTTCTCTATCCAGACAGTTTGACTTCATTTTCATAC
TTCACACTCTGAACTTCCACAGAGTGGGAAGCTCAGCTATCAGAACTTTAGAGGGACTAT
TCTTTTGAAATAAAAATTCATGCAATCCCAGGAGTGGGCCATATCTCGACAACAAGACAG
AGCTAAGACTGGGGGGGACATCAGTCGAAGATGGCAAAGCAAAGTTCGATACTTTTCTGA
ACGATAGTTTTTATATAATAAAGGTATTCATTGGAACCTGCTTCTTGAGCACACACACCA
CAAACAGCAGCTACCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTAGGTAGTAATAAAACTTTATTGAGGATGATGATGGTGATGATAATATTATTAG
CATTTGGTATTAAGAGATGATTTCAGCCTTTGTTCCCTTCCCACACACATTTCTTAAAAT
TTCAACCTTTGAAAGCTTCCCACGTTTCTCTATCCAGACAGTTTGACTTCATTTTCATAC
TTCACACTCTGAACTTCCACAGAGTGGGAAGCTCAGCTATCAGAACTTTAGAGGGACTAT
TCTTTTGAAATAAAAATTCATGCAATCCCAGGAGTGGGCCATATCTCGACAACAAGACAG
AGCTAAGACTGGGGGGGACATCAGTCGAAGATGGCAAAGCAAAGTTCGATACTTTTCTGA
ACGATAGTTTTTATATAATAAAGGTATTCATTGGAACCTGCTTCTTGAGCACACACACCA
CAAACAGCAGCTACCAC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               118-237, - strand, RNAz p=0.995341

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               118-237, - strand, RNAz p=0.995341

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-437, gnl|bosTau2|chr6 (8933305-8932876)
               

               
               7-437, gnl|Hg17|chr4 (101667360-101667798)
               

               
               7-437, gnl|Mm7|chr3 (137272442-137272060)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-437, gnl|bosTau2|chr6 (8933305-8932876)
               

               
               7-437, gnl|Hg17|chr4 (101667360-101667798)
               

               
               7-437, gnl|Mm7|chr3 (137272442-137272060)

	7-437, gnl\|bosTau2\|chr6 (8933305-8932876)
	7-437, gnl\|Hg17\|chr4 (101667360-101667798)
	7-437, gnl\|Mm7\|chr3 (137272442-137272060)