unkn-M55C
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTAGCATGGTAAAATACAAAGAAGACTATGAAAAGAATAAAGGAAAGGCAGATTATAAT GTACTTCCCGCTTCAGAAAACCCACTGCTCAGGCACCTGAAGGCAGCAGGAGATGCCCTA AGTGATAAAAGATACAAAGAAAACTATGAAAAGACAAAGGCAAAGAGCATAAATTACTGC GAGACCCCCAAATTTAAGCTAGATACGGTTCTGCATAACTTCAGTAGTGATACTAAATAT AAAGATTCCTACTTGAAGAATATTTTGGGACATTATGTAGGCAGCTTTGAGGATCCGTAT CATACACACTGCATGAAAGTCGCAGCTGAAAACAGTGATAAAAACTACAAAGCAGAATAT GAAGAGGACAGAGGCAAAGGTTTCTTCCCCCAGACCATAACTCAAGAATATGAAGCAATC AAGAAGTTAGACCAGTGTAAAGACCACACCTACAAAGTCCACCCAGATAAGACAAAATTC ACTCAAGTTACCGACTCTCCTGTTCTGGTGCAAGCCCAAGTCAATTCCAAACAGTTGAGT GATCTAAATTACAAAGCAAAACATGAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTAGCATGGTAAAATACAAAGAAGACTATGAAAAGAATAAAGGAAAGGCAGATTATAAT GTACTTCCCGCTTCAGAAAACCCACTGCTCAGGCACCTGAAGGCAGCAGGAGATGCCCTA AGTGATAAAAGATACAAAGAAAACTATGAAAAGACAAAGGCAAAGAGCATAAATTACTGC GAGACCCCCAAATTTAAGCTAGATACGGTTCTGCATAACTTCAGTAGTGATACTAAATAT AAAGATTCCTACTTGAAGAATATTTTGGGACATTATGTAGGCAGCTTTGAGGATCCGTAT CATACACACTGCATGAAAGTCGCAGCTGAAAACAGTGATAAAAACTACAAAGCAGAATAT GAAGAGGACAGAGGCAAAGGTTTCTTCCCCCAGACCATAACTCAAGAATATGAAGCAATC AAGAAGTTAGACCAGTGTAAAGACCACACCTACAAAGTCCACCCAGATAAGACAAAATTC ACTCAAGTTACCGACTCTCCTGTTCTGGTGCAAGCCCAAGTCAATTCCAAACAGTTGAGT GATCTAAATTACAAAGCAAAACATGAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 13-131, + strand, RNAz p=0.671327 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 13-131, + strand, RNAz p=0.671327 |
| Aligned organism(s): 52 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
| 9-131, gnl|bosTau2|chr2 (29597823-29597945) | |
| 9-131, gnl|canFam2|chr19 (55923806-55923980) | |
| 9-131, gnl|danRer3|chr9 (14944357-14944216) | |
| 9-131, gnl|dasNov1|scaffold_185 (198328-198511) | |
| 9-131, gnl|echTel1|scaffold_279087 (87785-87599) | |
| 9-131, gnl|fr1|chrUn (158666021-158666170) | |
| 9-131, gnl|galGal2|chr7 (35932991-35933144) | |
| 9-131, gnl|hg17|chr2 (152388896-152389079) | |
| 9-131, gnl|Hg17|chr2 (152389020-152388898) | |
| 9-131, gnl|loxAfr1|scaffold_239 (137063-137250) | |
| 9-131, gnl|mm7|chr2 (52317833-52318017) | |
| 9-131, gnl|Mm7|chr2 (52317957-52317835) | |
| 9-131, gnl|monDom2|scaffold_2 (42702126-42702307) | |
| 9-131, gnl|oryCun1|scaffold_187887 (51793-51610) | |
| 9-131, gnl|panTro1|chr13 (41447011-41447194) | |
| 9-131, gnl|rheMac2|chr12 (15378050-15378233) | |
| 9-131, gnl|rn3|chr3 (33707349-33707531) | |
| 9-131, gnl|tetNig1|chr2 (18030012-18030170) | |
| 232-339, gnl|bosTau2|chr2 (29599809-29599916) | |
| 232-339, gnl|canFam2|chr19 (55921844-55922004) | |
| 232-339, gnl|danRer3|chr9 (14946404-14946252) | |
| 232-339, gnl|dasNov1|scaffold_185 (191420-191580) | |
| 232-339, gnl|echTel1|scaffold_279087 (90689-90522) | |
| 232-339, gnl|fr1|chrUn (158665310-158665450) | |
| 232-339, gnl|galGal2|chr7 (35932071-35932228) | |
| 232-339, gnl|hg17|chr2 (152379330-152379490) | |
| 232-339, gnl|Hg17|chr2 (152379479-152379372) | |
| 232-339, gnl|loxAfr1|scaffold_239 (134495-134654) | |
| 232-339, gnl|mm7|chr2 (52315753-52315914) | |
| 232-339, gnl|Mm7|chr2 (52315903-52315796) | |
| 232-339, gnl|monDom2|scaffold_2 (42698754-42698900) | |
| 232-339, gnl|oryCun1|scaffold_187887 (53615-53455) | |
| 232-339, gnl|panTro1|chr13 (41444147-41444307) | |
| 232-339, gnl|rheMac2|chr12 (15375245-15375405) | |
| 232-339, gnl|rn3|chr3 (33705641-33705802) | |
| 232-339, gnl|tetNig1|chr2 (18029453-18029614) | |
| 232-339, gnl|xenTro1|scaffold_524 (32580-32670) | |
| 445-550, gnl|bosTau2|chr2 (29600536-29600641) | |
| 445-550, gnl|canFam2|chr19 (55921164-55921305) | |
| 445-550, gnl|danRer3|chr23 (32893913-32894051) | |
| 445-550, gnl|dasNov1|scaffold_185 (195659-195802) | |
| 445-550, gnl|echTel1|scaffold_279087 (91351-91208) | |
| 445-550, gnl|hg17|chr2 (152378636-152378779) | |
| 445-550, gnl|Hg17|chr2 (152378757-152378652) | |
| 445-550, gnl|loxAfr1|scaffold_239 (131199-131338) | |
| 445-550, gnl|mm7|chr2 (52314974-52315117) | |
| 445-550, gnl|Mm7|chr2 (52315095-52314990) | |
| 445-550, gnl|monDom2|scaffold_2 (42698019-42698153) | |
| 445-550, gnl|oryCun1|scaffold_187887 (54287-54144) | |
| 445-550, gnl|panTro1|chr13 (41443453-41443596) | |
| 445-550, gnl|rheMac2|chr12 (15374503-15374646) | |
| 445-550, gnl|rn3|chr3 (33704909-33705052) |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 9-131, gnl|bosTau2|chr2 (29597823-29597945) | |
| 9-131, gnl|canFam2|chr19 (55923806-55923980) | |
| 9-131, gnl|danRer3|chr9 (14944357-14944216) | |
| 9-131, gnl|dasNov1|scaffold_185 (198328-198511) | |
| 9-131, gnl|echTel1|scaffold_279087 (87785-87599) | |
| 9-131, gnl|fr1|chrUn (158666021-158666170) | |
| 9-131, gnl|galGal2|chr7 (35932991-35933144) | |
| 9-131, gnl|hg17|chr2 (152388896-152389079) | |
| 9-131, gnl|Hg17|chr2 (152389020-152388898) | |
| 9-131, gnl|loxAfr1|scaffold_239 (137063-137250) | |
| 9-131, gnl|mm7|chr2 (52317833-52318017) | |
| 9-131, gnl|Mm7|chr2 (52317957-52317835) | |
| 9-131, gnl|monDom2|scaffold_2 (42702126-42702307) | |
| 9-131, gnl|oryCun1|scaffold_187887 (51793-51610) | |
| 9-131, gnl|panTro1|chr13 (41447011-41447194) | |
| 9-131, gnl|rheMac2|chr12 (15378050-15378233) | |
| 9-131, gnl|rn3|chr3 (33707349-33707531) | |
| 9-131, gnl|tetNig1|chr2 (18030012-18030170) | |
| 232-339, gnl|bosTau2|chr2 (29599809-29599916) | |
| 232-339, gnl|canFam2|chr19 (55921844-55922004) | |
| 232-339, gnl|danRer3|chr9 (14946404-14946252) | |
| 232-339, gnl|dasNov1|scaffold_185 (191420-191580) | |
| 232-339, gnl|echTel1|scaffold_279087 (90689-90522) | |
| 232-339, gnl|fr1|chrUn (158665310-158665450) | |
| 232-339, gnl|galGal2|chr7 (35932071-35932228) | |
| 232-339, gnl|hg17|chr2 (152379330-152379490) | |
| 232-339, gnl|Hg17|chr2 (152379479-152379372) | |
| 232-339, gnl|loxAfr1|scaffold_239 (134495-134654) | |
| 232-339, gnl|mm7|chr2 (52315753-52315914) | |
| 232-339, gnl|Mm7|chr2 (52315903-52315796) | |
| 232-339, gnl|monDom2|scaffold_2 (42698754-42698900) | |
| 232-339, gnl|oryCun1|scaffold_187887 (53615-53455) | |
| 232-339, gnl|panTro1|chr13 (41444147-41444307) | |
| 232-339, gnl|rheMac2|chr12 (15375245-15375405) | |
| 232-339, gnl|rn3|chr3 (33705641-33705802) | |
| 232-339, gnl|tetNig1|chr2 (18029453-18029614) | |
| 232-339, gnl|xenTro1|scaffold_524 (32580-32670) | |
| 445-550, gnl|bosTau2|chr2 (29600536-29600641) | |
| 445-550, gnl|canFam2|chr19 (55921164-55921305) | |
| 445-550, gnl|danRer3|chr23 (32893913-32894051) | |
| 445-550, gnl|dasNov1|scaffold_185 (195659-195802) | |
| 445-550, gnl|echTel1|scaffold_279087 (91351-91208) | |
| 445-550, gnl|hg17|chr2 (152378636-152378779) | |
| 445-550, gnl|Hg17|chr2 (152378757-152378652) | |
| 445-550, gnl|loxAfr1|scaffold_239 (131199-131338) | |
| 445-550, gnl|mm7|chr2 (52314974-52315117) | |
| 445-550, gnl|Mm7|chr2 (52315095-52314990) | |
| 445-550, gnl|monDom2|scaffold_2 (42698019-42698153) | |
| 445-550, gnl|oryCun1|scaffold_187887 (54287-54144) | |
| 445-550, gnl|panTro1|chr13 (41443453-41443596) | |
| 445-550, gnl|rheMac2|chr12 (15374503-15374646) | |
| 445-550, gnl|rn3|chr3 (33704909-33705052) |