unkn-MI-P-A1-acn-g-01-1-UM.s1
|
TTTTTTTTTTTTTTTTTTCAACAAACAACAAATATTTATGTGAGCGCCTATGGATGTGCC
AGGCACTGTTCTGAGATAGACCCCCCCCAAGGGAAAAACAAGAGGCAAGAAAACGCAAAT
TCTGGAGGGAGAGGAAAGGGGCAGTTGAAGAAGGCTGAGGGGGCTGAGAAGCCTGAGGTG
ATGGGGCTCGGGCTTAGGCCTCCTCTTCGGGCTCCTCACCGAAATCCTCCTCCTCGTCTG
CGGTGGGATCCTGGGACTGCTGGGACTCAGAGACGAGGGCAGTCATGTTGCGCGCAGG
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Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTTTTTTTTTTTTTTTTCAACAAACAACAAATATTTATGTGAGCGCCTATGGATGTGCC
AGGCACTGTTCTGAGATAGACCCCCCCCAAGGGAAAAACAAGAGGCAAGAAAACGCAAAT
TCTGGAGGGAGAGGAAAGGGGCAGTTGAAGAAGGCTGAGGGGGCTGAGAAGCCTGAGGTG
ATGGGGCTCGGGCTTAGGCCTCCTCTTCGGGCTCCTCACCGAAATCCTCCTCCTCGTCTG
CGGTGGGATCCTGGGACTGCTGGGACTCAGAGACGAGGGCAGTCATGTTGCGCGCAGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
135-254, + strand, RNAmicro p=0.97794 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
135-254, + strand, RNAmicro p=0.97794 |
|
128-240, CJ019109 full-length enriched swine cDNA library, adult spleen Sus
(dbj|CJ019109.1|), blast E-value=0, identity=97.35% |
|
128-240, CJ020840 full-length enriched swine cDNA library, adult spleen Sus
(dbj|CJ020840.1|), blast E-value=0, identity=97.35% |
|
128-240, CJ020841 full-length enriched swine cDNA library, adult spleen Sus
(dbj|CJ020841.1|), blast E-value=0, identity=97.35% |
|
128-240, CJ033082 full-length enriched swine cDNA library, adult testis Sus
(dbj|CJ033082.1|), blast E-value=0, identity=97.35% |
|
128-240, PADT0811023_C16R porcine adipose tissue cDNA library (PADT) Sus
(gb|EB419916.1|), blast E-value=0, identity=97.35% |
|
128-240, PADT0811024_D14F porcine adipose tissue cDNA library (PADT) Sus
(gb|EB420295.1|), blast E-value=0, identity=97.35% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
128-240, CJ019109 full-length enriched swine cDNA library, adult spleen Sus
(dbj|CJ019109.1|), blast E-value=0, identity=97.35% |
|
128-240, CJ020840 full-length enriched swine cDNA library, adult spleen Sus
(dbj|CJ020840.1|), blast E-value=0, identity=97.35% |
|
128-240, CJ020841 full-length enriched swine cDNA library, adult spleen Sus
(dbj|CJ020841.1|), blast E-value=0, identity=97.35% |
|
128-240, CJ033082 full-length enriched swine cDNA library, adult testis Sus
(dbj|CJ033082.1|), blast E-value=0, identity=97.35% |
|
128-240, PADT0811023_C16R porcine adipose tissue cDNA library (PADT) Sus
(gb|EB419916.1|), blast E-value=0, identity=97.35% |
|
128-240, PADT0811024_D14F porcine adipose tissue cDNA library (PADT) Sus
(gb|EB420295.1|), blast E-value=0, identity=97.35% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
