Non-Coding RNA Search

unkn-MI-P-A3-abv-e-10-1-UM.s1

Sequence:


               
               TTTTTTTTTTTTTTTTTTAAAAGGTGAGAAGTTTTAGTGCTCTTGTAGCCAGCCCACCTT
AAACCTATATAACAAGCTTTTTACAGCAAACAAAATAGATTAGTAACTATGAGGATCACA
TTCCCATTCTTCGACAGTGAATATACATAATAAATCTGTTATTAACAGAGGGACCAAATT
ATGCAAAAGGCAAAGACATTTAAATAGGTTCTGTGTCATCAACATGCTCTGAAAAAGAAG
ATCCATCTGACTCGATCTACTCCCAGGCCTTTTCTCATGAGGCCAAGAAAATGAAAATAT
AATCAAACACCCACATGACACAGTCCAAACGCTGGGGAATACGAGGGGCAGCAGGTCATA
GGGGAAGAAGATATCAGCCCCAATGAAAAGCTGAGGTTTGGCTTTCACATATGATGCTAA
TTTTGACGCTCTGTGTTTCAGTAAAGGGGGAAAAAAGATCCGCTTTGATAACATTGGTAA
AAAGGCATCAACTCCCATTTCAAAAATAAATGGGAAGACTTCACAGTCCGAGTTCAGTAA
CCTGTCAGCATCTACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTAAAAGGTGAGAAGTTTTAGTGCTCTTGTAGCCAGCCCACCTT
AAACCTATATAACAAGCTTTTTACAGCAAACAAAATAGATTAGTAACTATGAGGATCACA
TTCCCATTCTTCGACAGTGAATATACATAATAAATCTGTTATTAACAGAGGGACCAAATT
ATGCAAAAGGCAAAGACATTTAAATAGGTTCTGTGTCATCAACATGCTCTGAAAAAGAAG
ATCCATCTGACTCGATCTACTCCCAGGCCTTTTCTCATGAGGCCAAGAAAATGAAAATAT
AATCAAACACCCACATGACACAGTCCAAACGCTGGGGAATACGAGGGGCAGCAGGTCATA
GGGGAAGAAGATATCAGCCCCAATGAAAAGCTGAGGTTTGGCTTTCACATATGATGCTAA
TTTTGACGCTCTGTGTTTCAGTAAAGGGGGAAAAAAGATCCGCTTTGATAACATTGGTAA
AAAGGCATCAACTCCCATTTCAAAAATAAATGGGAAGACTTCACAGTCCGAGTTCAGTAA
CCTGTCAGCATCTACC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               420-534, + strand, RNAz p=0.80102

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               420-534, + strand, RNAz p=0.80102

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-556, gnl|bosTau2|chr19 (34372197-34372743)
               

               
               16-556, gnl|Hg17|chr17 (35690869-35690338)
               

               
               16-556, gnl|Mm7|chr11 (99011368-99010741)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-556, gnl|bosTau2|chr19 (34372197-34372743)
               

               
               16-556, gnl|Hg17|chr17 (35690869-35690338)
               

               
               16-556, gnl|Mm7|chr11 (99011368-99010741)

	16-556, gnl\|bosTau2\|chr19 (34372197-34372743)
	16-556, gnl\|Hg17\|chr17 (35690869-35690338)
	16-556, gnl\|Mm7\|chr11 (99011368-99010741)