Non-Coding RNA Search

unkn-MI-P-AY0-nag-e-02-0-UI.s1

Sequence:


               
               TTTTTTTTTTTTTTTTTGGAATGCAACAACTTTATTGAAAGAAAAGTGCAATGAAATTTG
TTGAAAGCTTAAAAGGGAGAACTTATGAACCTCCCCTCAAACGCAAGACCAAGTGCATGG
TGGACACCTTCTGGATGTTGTACTCAGACAGGGATCACCCATCTTCCATCTGCCTCCCGG
CAAAGATCACCCTCTGCAGGTCTGGGGGGATGCCTTCCATGTCCTGCATCTTCGTCTTGA
CATTCTCGATGGCGTCCCTGGGCTCCACTTCCAAGGTGAAGGCCATACCAGTCAAGGTCT
TCACGAAGATCTGCATCCCACCTCTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTGGAATGCAACAACTTTATTGAAAGAAAAGTGCAATGAAATTTG
TTGAAAGCTTAAAAGGGAGAACTTATGAACCTCCCCTCAAACGCAAGACCAAGTGCATGG
TGGACACCTTCTGGATGTTGTACTCAGACAGGGATCACCCATCTTCCATCTGCCTCCCGG
CAAAGATCACCCTCTGCAGGTCTGGGGGGATGCCTTCCATGTCCTGCATCTTCGTCTTGA
CATTCTCGATGGCGTCCCTGGGCTCCACTTCCAAGGTGAAGGCCATACCAGTCAAGGTCT
TCACGAAGATCTGCATCCCACCTCTGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|3954791|emb|CAA26488.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|3954791|emb|CAA26488.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               144-327, + strand, RNAz p=0.998227

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               144-327, + strand, RNAz p=0.998227

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               15-327, gnl|bosTau2|chr17 (26090378-26090691)
               

               
               15-327, gnl|Hg17|chr12 (123921072-123921384)
               


               
               144-317, gnl|bosTau2|chr11 (21613350-21613177)
               

               
               144-317, gnl|Hg17|chr1 (189417142-189416969)
               

               
               144-317, gnl|Mm7|chr9 (83508066-83507905)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-327, gnl|bosTau2|chr17 (26090378-26090691)
               

               
               15-327, gnl|Hg17|chr12 (123921072-123921384)
               


               
               144-317, gnl|bosTau2|chr11 (21613350-21613177)
               

               
               144-317, gnl|Hg17|chr1 (189417142-189416969)
               

               
               144-317, gnl|Mm7|chr9 (83508066-83507905)

	15-327, gnl\|bosTau2\|chr17 (26090378-26090691)
	15-327, gnl\|Hg17\|chr12 (123921072-123921384)

	144-317, gnl\|bosTau2\|chr11 (21613350-21613177)
	144-317, gnl\|Hg17\|chr1 (189417142-189416969)
	144-317, gnl\|Mm7\|chr9 (83508066-83507905)