Non-Coding RNA Search

unkn-MI-P-AY0-net-g-12-0-UI.s1

Sequence:


               
               TTTTTTTTTTTTTTTTTCCATTTACAGTTGCCAAAAAAAAAAAAATTGGCTTTTTAATTA
AATAAAACGGATGAGGTTGGTTCCAAAATTTTTACACATTTCAAAAAAGTGTACAAAACC
GCCAACCCAGCAAAGGTGACAGGCTTTTTTTATCCACCCCTTGTATTGCAGAGGAAACTG
TGCATGTGGAAAGCACGGTTCGGCTTTTCAAAAGCTTTCTTTACCTTTAGCCCCCCAAAT
TTTTTCCAAAATTCTCCACGTCCCAATTCCTTCTTTTCCCCCCTTTGCCTTTCACCCTTG
TATGAACCCGTAAGGTCACCAAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTCCATTTACAGTTGCCAAAAAAAAAAAAATTGGCTTTTTAATTA
AATAAAACGGATGAGGTTGGTTCCAAAATTTTTACACATTTCAAAAAAGTGTACAAAACC
GCCAACCCAGCAAAGGTGACAGGCTTTTTTTATCCACCCCTTGTATTGCAGAGGAAACTG
TGCATGTGGAAAGCACGGTTCGGCTTTTCAAAAGCTTTCTTTACCTTTAGCCCCCCAAAT
TTTTTCCAAAATTCTCCACGTCCCAATTCCTTCTTTTCCCCCCTTTGCCTTTCACCCTTG
TATGAACCCGTAAGGTCACCAAAAAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               166-284, - strand, RNAz p=0.627804

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               166-284, - strand, RNAz p=0.627804

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_006243, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_006243, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               13-284, gnl|bosTau2|chr16 (53240570-53240842)
               

               
               13-284, gnl|Hg17|chr1 (208922643-208922373)
               

               
               13-284, gnl|Mm7|chr1 (190906346-190906617)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-284, gnl|bosTau2|chr16 (53240570-53240842)
               

               
               13-284, gnl|Hg17|chr1 (208922643-208922373)
               

               
               13-284, gnl|Mm7|chr1 (190906346-190906617)

	13-284, gnl\|bosTau2\|chr16 (53240570-53240842)
	13-284, gnl\|Hg17\|chr1 (208922643-208922373)
	13-284, gnl\|Mm7\|chr1 (190906346-190906617)