Non-Coding RNA Search

unkn-MI-P-E5-abn-b-09-1-UM.s1

Sequence:


               
               CAGCAGGCGTGGCCTGCATGAGGTGGTGGGTGTGCTGGGCTCAGAGTATGTGTGGGCTGT
GAGGAACAGATNATACCTGGGAGACTAGGAGGAAAGGGGTGGGTCTGAAGGCCAGGCCCA
AAGGCTCCTCAGATTTACTTCTGGGTAGACTTAATAAAGGAGTCATGGCAAGCTATGGCC
AGGCCGCCAATAAGATTAAGAAATTCTTGGAAATCTAGCTGCCCATCAGAGTCGAGGTCC
AATTTCTTCATCATGCGGTCAAGGACACCAGGGTCTTTCTGGTTCTGTGTGAAGGCAGCC
AGCTCTGTATTCATGAAAATTAGGAACTCGGTCTTGGAGATNTTCGTGTTGTTACCGAAG
GGGTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCAGGCGTGGCCTGCATGAGGTGGTGGGTGTGCTGGGCTCAGAGTATGTGTGGGCTGT
GAGGAACAGATNATACCTGGGAGACTAGGAGGAAAGGGGTGGGTCTGAAGGCCAGGCCCA
AAGGCTCCTCAGATTTACTTCTGGGTAGACTTAATAAAGGAGTCATGGCAAGCTATGGCC
AGGCCGCCAATAAGATTAAGAAATTCTTGGAAATCTAGCTGCCCATCAGAGTCGAGGTCC
AATTTCTTCATCATGCGGTCAAGGACACCAGGGTCTTTCTGGTTCTGTGTGAAGGCAGCC
AGCTCTGTATTCATGAAAATTAGGAACTCGGTCTTGGAGATNTTCGTGTTGTTACCGAAG
GGGTTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|51592139|ref|NP_001004045.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51592139|ref|NP_001004045.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               4-154, + strand, RNAz p=0.958087

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               4-154, + strand, RNAz p=0.958087

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-287, gnl|bosTau2|chr3 (14744420-14744133)
               

               
               4-287, gnl|Hg17|chr1 (148818095-148818375)
               

               
               4-287, gnl|Mm7|chr3 (93627965-93627705)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-287, gnl|bosTau2|chr3 (14744420-14744133)
               

               
               4-287, gnl|Hg17|chr1 (148818095-148818375)
               

               
               4-287, gnl|Mm7|chr3 (93627965-93627705)

	4-287, gnl\|bosTau2\|chr3 (14744420-14744133)
	4-287, gnl\|Hg17\|chr1 (148818095-148818375)
	4-287, gnl\|Mm7\|chr3 (93627965-93627705)